G2290681


Basic Information

Item Value
gene id G2290681
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 4815354 ~ 4816497 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2619639
AGATAATTGGCTACTCTGAGATACATCTTGCCCTCTTCTACAAGATGATTGGCTACAGGCAACATGGCTCAATAGAACCATGACGATTTAATAACATGATTTCGAGTATGAGTACAAAGCCCTTAATGATGATGACTTAATTAAGATAGTACGTCTGAATCCcacatggcatcctattccctatgtagtacactactttagaccagagccctatggtaccctattccctatgtagtgcactacttcagaccagagccctatggtaccctagcccatatatatagtacactactttagaccagagccctatggtaccatattccctatgtagtgcactac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2619639 True 339 lncRNA 0.42 3 4815354 4816497

Neighbor

gene id symbol gene type direction distance location
LOC118946537 NA coding upstream 1633554 3160218 ~ 3181800 (+)
angpt2b LOC106570762 coding upstream 1823266 2930144 ~ 2992088 (+)
LOC110487826 znf519 coding upstream 1928570 2883928 ~ 2886784 (+)
LOC110487823 LOC106570755 coding upstream 1969788 2816476 ~ 2845566 (+)
pip4p2 LOC106570754 coding upstream 2015162 2766685 ~ 2800192 (+)
pef1 pef1 coding downstream 186481 5002978 ~ 5011804 (+)
smim12 smim12 coding downstream 198052 5014549 ~ 5018314 (+)
dlgap3 dlgap3 coding downstream 479312 5113201 ~ 5412625 (+)
LOC110513117 LOC106589108 coding downstream 692504 5509001 ~ 5525069 (+)
LOC110489357 slc6a19 coding downstream 775615 5592112 ~ 5615373 (+)
G2290666 NA non-coding upstream 33929 4781215 ~ 4781425 (+)
G2290663 NA non-coding upstream 40646 4774435 ~ 4774708 (+)
G2290660 NA non-coding upstream 41592 4772751 ~ 4773762 (+)
G2290655 NA non-coding upstream 47275 4767839 ~ 4768079 (+)
G2290649 NA non-coding upstream 51929 4762782 ~ 4763425 (+)
G2290713 NA non-coding downstream 12806 4829303 ~ 4829580 (+)
G2290715 NA non-coding downstream 13185 4829682 ~ 4829906 (+)
G2290725 NA non-coding downstream 20821 4837318 ~ 4837564 (+)
G2290735 NA non-coding downstream 30897 4847394 ~ 4847743 (+)
G2290738 NA non-coding downstream 35298 4851795 ~ 4851998 (+)
G2290455 NA other upstream 266510 4546904 ~ 4548844 (+)
G2290395 NA other upstream 365783 4448889 ~ 4449571 (+)
G2289325 NA other upstream 1754575 3060442 ~ 3060779 (+)
G2288814 NA other upstream 2433959 2380447 ~ 2381395 (+)
G2288669 NA other upstream 2491172 2321874 ~ 2324182 (+)
G2291194 NA other downstream 600335 5416832 ~ 5418238 (+)
G2291219 NA other downstream 655066 5471563 ~ 5472153 (+)
wipf3 NA other downstream 907827 5724270 ~ 5749736 (+)

Expression


Co-expression Network