G2290789


Basic Information

Item Value
gene id G2290789
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 4923207 ~ 4923516 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2619772
TAATGATTGTAGATCCTAATGATTGTCGATCGTAATGACTGTAGATTCTAACGACTGTAAATCTCCTAATGGCTGTAGATCCTAACGACTGTAGATCCTAACGACTGTAGATCCTAACGACTGTAGATCCTAACGACTGTAGATCCTAACGACTGTAGATCCTAACAACTGTAGATCTCCTAATGGCTGTAGATCTCCTAATGACTGTAGATCTCATAATGACTGTAGATCTCCTAATGACTGTAGATATTAACGACTGTAGATCCTAATGACTGTAGATCCTAACGACTGTAGATCTCCTAATGACTGT

Function

NR:

description
spidroin-1-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2619772 True 310 lncRNA 0.39 1 4923207 4923516

Neighbor

gene id symbol gene type direction distance location
LOC118946537 NA coding upstream 1741407 3160218 ~ 3181800 (+)
angpt2b LOC106570762 coding upstream 1931119 2930144 ~ 2992088 (+)
LOC110487826 znf519 coding upstream 2036423 2883928 ~ 2886784 (+)
LOC110487823 LOC106570755 coding upstream 2077641 2816476 ~ 2845566 (+)
pip4p2 LOC106570754 coding upstream 2123015 2766685 ~ 2800192 (+)
pef1 pef1 coding downstream 79462 5002978 ~ 5011804 (+)
smim12 smim12 coding downstream 91033 5014549 ~ 5018314 (+)
dlgap3 dlgap3 coding downstream 372293 5113201 ~ 5412625 (+)
LOC110513117 LOC106589108 coding downstream 585485 5509001 ~ 5525069 (+)
LOC110489357 slc6a19 coding downstream 668596 5592112 ~ 5615373 (+)
G2290781 NA non-coding upstream 7774 4915185 ~ 4915433 (+)
G2290780 NA non-coding upstream 19157 4903826 ~ 4904050 (+)
G2290768 NA non-coding upstream 29519 4891734 ~ 4893688 (+)
G2290758 NA non-coding upstream 45924 4876183 ~ 4877283 (+)
G2290754 NA non-coding upstream 61404 4861598 ~ 4861803 (+)
G2290798 NA non-coding downstream 7027 4930543 ~ 4931121 (+)
G2290808 NA non-coding downstream 16989 4940505 ~ 4940742 (+)
G2290811 NA non-coding downstream 21058 4944574 ~ 4944825 (+)
G2290812 NA non-coding downstream 22138 4945654 ~ 4947399 (+)
G2290821 NA non-coding downstream 29482 4952998 ~ 4953201 (+)
G2290455 NA other upstream 374363 4546904 ~ 4548844 (+)
G2290395 NA other upstream 473636 4448889 ~ 4449571 (+)
G2289325 NA other upstream 1862428 3060442 ~ 3060779 (+)
G2288814 NA other upstream 2541812 2380447 ~ 2381395 (+)
G2288669 NA other upstream 2599025 2321874 ~ 2324182 (+)
G2291194 NA other downstream 493316 5416832 ~ 5418238 (+)
G2291219 NA other downstream 548047 5471563 ~ 5472153 (+)
wipf3 NA other downstream 800808 5724270 ~ 5749736 (+)

Expression


Co-expression Network