Gene
RNA
| Item | Value |
|---|---|
| gene id | G2290826 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050572.1 |
| NCBI id | CM025859.1 |
| chromosome length | 41837469 |
| location | 4957942 ~ 4958169 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2619810 | True | 228 | lncRNA | 0.40 | 1 | 4957942 | 4958169 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118946538 | LOC106570740 | coding | downstream | 635154 | 4110893 ~ 4322788 (-) |
| csmd2 | LOC107698986 | coding | downstream | 1078335 | 3495523 ~ 3879607 (-) |
| LOC118946526 | csmd2 | coding | downstream | 1464824 | 3447097 ~ 3493118 (-) |
| LOC110487827 | LOC106570760 | coding | downstream | 2077956 | 2863586 ~ 2879986 (-) |
| tdp2b | tdp2 | coding | downstream | 2095428 | 2854915 ~ 2862514 (-) |
| gja4 | LOC106589111 | coding | upstream | 82711 | 5040880 ~ 5067538 (-) |
| LOC118946459 | NA | coding | upstream | 458917 | 5417086 ~ 5418079 (-) |
| LOC110487843 | LOC106570718 | coding | upstream | 494179 | 5452348 ~ 5468330 (-) |
| zbtb8b | LOC106570719 | coding | upstream | 520989 | 5479158 ~ 5489347 (-) |
| gstr | gsta | coding | upstream | 580613 | 5538782 ~ 5544491 (-) |
| G2290810 | NA | non-coding | downstream | 13555 | 4943723 ~ 4944387 (-) |
| G2290803 | NA | non-coding | downstream | 20966 | 4936742 ~ 4936976 (-) |
| G2290800 | NA | non-coding | downstream | 24008 | 4933669 ~ 4933934 (-) |
| G2290799 | NA | non-coding | downstream | 26698 | 4930601 ~ 4931244 (-) |
| G2290766 | NA | non-coding | downstream | 73805 | 4879234 ~ 4884137 (-) |
| G2290828 | NA | non-coding | upstream | 224 | 4958393 ~ 4958649 (-) |
| G2290836 | NA | non-coding | upstream | 27389 | 4985558 ~ 4985871 (-) |
| G2290900 | NA | non-coding | upstream | 55899 | 5014068 ~ 5014426 (-) |
| G2290907 | NA | non-coding | upstream | 73051 | 5031220 ~ 5032054 (-) |
| G2290930 | NA | non-coding | upstream | 122085 | 5080254 ~ 5080564 (-) |
| G2290770 | NA | other | downstream | 62494 | 4893036 ~ 4895448 (-) |
| G2290764 | NA | other | downstream | 76115 | 4873107 ~ 4881827 (-) |
| G2290755 | NA | other | downstream | 95815 | 4861784 ~ 4862127 (-) |
| G2290685 | NA | other | downstream | 139240 | 4783622 ~ 4818702 (-) |
| G2290582 | NA | other | downstream | 280300 | 4677214 ~ 4677642 (-) |
| G2290832 | NA | other | upstream | 2117 | 4960286 ~ 4960665 (-) |
| G2290833 | NA | other | upstream | 2991 | 4961160 ~ 4961760 (-) |
| G2290915 | NA | other | upstream | 79296 | 5037465 ~ 5038317 (-) |
