G2290831


Basic Information

Item Value
gene id G2290831
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 4960395 ~ 4960643 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2619815
ttcgccaccctcggcctccattccattcgccactctcggcctccattcgccaccctcggactccattcgccaccctcggcatCCATTCGCCACCAACGATCTCCATTCGCcacgctctgtctccattcgccacgctctgtctccattcgccacgctctgtctccattcgccaccctcggcctccattcgccaccctcggcctccattcgccaccctctgcctccattcgccaccctcggactccattcg

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU2619815 True 249 lncRNA 0.63 1 4960395 4960643

Neighbor

gene id symbol gene type direction distance location
LOC118946537 NA coding upstream 1778595 3160218 ~ 3181800 (+)
angpt2b LOC106570762 coding upstream 1968307 2930144 ~ 2992088 (+)
LOC110487826 znf519 coding upstream 2073611 2883928 ~ 2886784 (+)
LOC110487823 LOC106570755 coding upstream 2114829 2816476 ~ 2845566 (+)
pip4p2 LOC106570754 coding upstream 2160203 2766685 ~ 2800192 (+)
pef1 pef1 coding downstream 42335 5002978 ~ 5011804 (+)
smim12 smim12 coding downstream 53906 5014549 ~ 5018314 (+)
dlgap3 dlgap3 coding downstream 335166 5113201 ~ 5412625 (+)
LOC110513117 LOC106589108 coding downstream 548358 5509001 ~ 5525069 (+)
LOC110489357 slc6a19 coding downstream 631469 5592112 ~ 5615373 (+)
G2290821 NA non-coding upstream 7194 4952998 ~ 4953201 (+)
G2290812 NA non-coding upstream 12996 4945654 ~ 4947399 (+)
G2290811 NA non-coding upstream 15570 4944574 ~ 4944825 (+)
G2290808 NA non-coding upstream 19653 4940505 ~ 4940742 (+)
G2290798 NA non-coding upstream 29274 4930543 ~ 4931121 (+)
G2290838 NA non-coding downstream 26074 4986717 ~ 4986968 (+)
G2290848 NA non-coding downstream 32855 4993498 ~ 4993813 (+)
G2290867 NA non-coding downstream 51581 5012224 ~ 5012658 (+)
G2290872 NA non-coding downstream 52792 5013435 ~ 5013733 (+)
G2290933 NA non-coding downstream 124193 5084836 ~ 5085092 (+)
G2290455 NA other upstream 411551 4546904 ~ 4548844 (+)
G2290395 NA other upstream 510824 4448889 ~ 4449571 (+)
G2289325 NA other upstream 1899616 3060442 ~ 3060779 (+)
G2288814 NA other upstream 2579000 2380447 ~ 2381395 (+)
G2288669 NA other upstream 2636213 2321874 ~ 2324182 (+)
G2291194 NA other downstream 456189 5416832 ~ 5418238 (+)
G2291219 NA other downstream 510920 5471563 ~ 5472153 (+)
wipf3 NA other downstream 763681 5724270 ~ 5749736 (+)

Expression


Co-expression Network