Gene
RNA
| Item | Value |
|---|---|
| gene id | G2290915 |
| gene name | NA |
| gene type | unknown |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050572.1 |
| NCBI id | CM025859.1 |
| chromosome length | 41837469 |
| location | 5037465 ~ 5038317 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2619915 | False | 517 | TUCP | 0.49 | 2 | 5037465 | 5038317 |
| TU2619916 | True | 685 | TUCP | 0.49 | 2 | 5037465 | 5038317 |
5,034,400
5,034,800
5,035,200
5,035,600
5,036,000
5,036,400
5,036,800
5,037,200
5,037,600
5,038,000
5,038,400
5,038,800
5,039,200
5,039,600
5,040,000
NC_050572.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118946538 | LOC106570740 | coding | downstream | 714677 | 4110893 ~ 4322788 (-) |
| csmd2 | LOC107698986 | coding | downstream | 1157858 | 3495523 ~ 3879607 (-) |
| LOC118946526 | csmd2 | coding | downstream | 1544347 | 3447097 ~ 3493118 (-) |
| LOC110487827 | LOC106570760 | coding | downstream | 2157479 | 2863586 ~ 2879986 (-) |
| tdp2b | tdp2 | coding | downstream | 2174951 | 2854915 ~ 2862514 (-) |
| gja4 | LOC106589111 | coding | upstream | 2563 | 5040880 ~ 5067538 (-) |
| LOC118946459 | NA | coding | upstream | 378769 | 5417086 ~ 5418079 (-) |
| LOC110487843 | LOC106570718 | coding | upstream | 414031 | 5452348 ~ 5468330 (-) |
| zbtb8b | LOC106570719 | coding | upstream | 440841 | 5479158 ~ 5489347 (-) |
| gstr | gsta | coding | upstream | 500465 | 5538782 ~ 5544491 (-) |
| G2290907 | NA | non-coding | downstream | 5411 | 5031220 ~ 5032054 (-) |
| G2290900 | NA | non-coding | downstream | 23039 | 5014068 ~ 5014426 (-) |
| G2290836 | NA | non-coding | downstream | 51594 | 4985558 ~ 4985871 (-) |
| G2290828 | NA | non-coding | downstream | 78816 | 4958393 ~ 4958649 (-) |
| G2290826 | NA | non-coding | downstream | 79296 | 4957942 ~ 4958169 (-) |
| G2290930 | NA | non-coding | upstream | 41937 | 5080254 ~ 5080564 (-) |
| G2290932 | NA | non-coding | upstream | 45603 | 5083920 ~ 5084158 (-) |
| G2290934 | NA | non-coding | upstream | 47207 | 5085524 ~ 5085785 (-) |
| G2290937 | NA | non-coding | upstream | 54978 | 5093295 ~ 5093502 (-) |
| G2290939 | NA | non-coding | upstream | 56655 | 5094972 ~ 5095172 (-) |
| G2290833 | NA | other | downstream | 75705 | 4961160 ~ 4961760 (-) |
| G2290832 | NA | other | downstream | 76800 | 4960286 ~ 4960665 (-) |
| G2290770 | NA | other | downstream | 142017 | 4893036 ~ 4895448 (-) |
| G2290764 | NA | other | downstream | 155638 | 4873107 ~ 4881827 (-) |
| G2290755 | NA | other | downstream | 175338 | 4861784 ~ 4862127 (-) |
| G2291639 | NA | other | upstream | 470170 | 5508487 ~ 5509139 (-) |
| G2292176 | NA | other | upstream | 1538758 | 6577075 ~ 6577556 (-) |
| G2292514 | NA | other | upstream | 1902959 | 6941276 ~ 6946764 (-) |
