G2290933


Basic Information

Item Value
gene id G2290933
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 5084836 ~ 5085092 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2619940
gagagggatatagcaGCAGTGTCTGTTTGAGGTAGAGGGGGAAACAGCAACAGTGTCTgtgtgaggtagagagggaaacagcaacagtgtctttgtgaggtagagagggaaacagcaacagtgtctgtgtgaggtagagagggaaacagcaacagtgtctgtgtgaggtagatagggaaacagcagaagtgtctgtgtgaggtagagagggaaacagcaacagtgtctgtgtgagagagggaaacagcaacagtgtc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2619940 True 257 lncRNA 0.49 1 5084836 5085092

Neighbor

gene id symbol gene type direction distance location
smim12 smim12 coding upstream 66888 5014549 ~ 5018314 (+)
pef1 pef1 coding upstream 73032 5002978 ~ 5011804 (+)
LOC118946537 NA coding upstream 1903036 3160218 ~ 3181800 (+)
angpt2b LOC106570762 coding upstream 2092748 2930144 ~ 2992088 (+)
LOC110487826 znf519 coding upstream 2198052 2883928 ~ 2886784 (+)
dlgap3 dlgap3 coding downstream 210717 5113201 ~ 5412625 (+)
LOC110513117 LOC106589108 coding downstream 423909 5509001 ~ 5525069 (+)
LOC110489357 slc6a19 coding downstream 507020 5592112 ~ 5615373 (+)
slc6a18 LOC106570711 coding downstream 547205 5632297 ~ 5641547 (+)
LOC110489437 LOC106570711 coding downstream 560091 5645183 ~ 5677904 (+)
G2290872 NA non-coding upstream 71103 5013435 ~ 5013733 (+)
G2290867 NA non-coding upstream 72178 5012224 ~ 5012658 (+)
G2290848 NA non-coding upstream 91023 4993498 ~ 4993813 (+)
G2290838 NA non-coding upstream 97868 4986717 ~ 4986968 (+)
G2290831 NA non-coding upstream 124193 4960395 ~ 4960643 (+)
G2290938 NA non-coding downstream 9880 5094972 ~ 5095182 (+)
G2290955 NA non-coding downstream 24479 5109571 ~ 5109858 (+)
G2290967 NA non-coding downstream 35454 5120546 ~ 5120936 (+)
G2290970 NA non-coding downstream 37534 5122626 ~ 5123090 (+)
G2290455 NA other upstream 535992 4546904 ~ 4548844 (+)
G2290395 NA other upstream 635265 4448889 ~ 4449571 (+)
G2289325 NA other upstream 2024057 3060442 ~ 3060779 (+)
G2288814 NA other upstream 2703441 2380447 ~ 2381395 (+)
G2291194 NA other downstream 331740 5416832 ~ 5418238 (+)
G2291219 NA other downstream 386471 5471563 ~ 5472153 (+)
wipf3 NA other downstream 639232 5724270 ~ 5749736 (+)
G2291490 NA other downstream 1062732 6147824 ~ 6148246 (+)

Expression


Co-expression Network