G2290955


Basic Information

Item Value
gene id G2290955
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 5109571 ~ 5109858 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2619964
ttccggttactagtccaacgctctaaccgcccCAATTAGGATCTAGCAAAAAATACTTggatcagttatagaacccattgccctttatgggttctaagaattcacaaaatgggacaaacaccaaattgaaactgcatgcagaattctgcaaaaatatcctctgtgtacaacgtagaacaccaaataatgcatgcagagcagaattaggccgatacccgctaattatcaaaatccagaaaagagctgttaaattctataaccacctaaaaggaagcgattcccaaacct

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2619964 True 288 lncRNA 0.40 1 5109571 5109858

Neighbor

gene id symbol gene type direction distance location
smim12 smim12 coding upstream 91623 5014549 ~ 5018314 (+)
pef1 pef1 coding upstream 97767 5002978 ~ 5011804 (+)
LOC118946537 NA coding upstream 1927771 3160218 ~ 3181800 (+)
angpt2b LOC106570762 coding upstream 2117483 2930144 ~ 2992088 (+)
LOC110487826 znf519 coding upstream 2222787 2883928 ~ 2886784 (+)
dlgap3 dlgap3 coding downstream 185951 5113201 ~ 5412625 (+)
LOC110513117 LOC106589108 coding downstream 399143 5509001 ~ 5525069 (+)
LOC110489357 slc6a19 coding downstream 482254 5592112 ~ 5615373 (+)
slc6a18 LOC106570711 coding downstream 522439 5632297 ~ 5641547 (+)
LOC110489437 LOC106570711 coding downstream 535325 5645183 ~ 5677904 (+)
G2290938 NA non-coding upstream 14389 5094972 ~ 5095182 (+)
G2290933 NA non-coding upstream 24479 5084836 ~ 5085092 (+)
G2290872 NA non-coding upstream 95838 5013435 ~ 5013733 (+)
G2290867 NA non-coding upstream 96913 5012224 ~ 5012658 (+)
G2290848 NA non-coding upstream 115758 4993498 ~ 4993813 (+)
G2290967 NA non-coding downstream 10688 5120546 ~ 5120936 (+)
G2290970 NA non-coding downstream 12768 5122626 ~ 5123090 (+)
G2290994 NA non-coding downstream 60554 5170412 ~ 5171309 (+)
G2291000 NA non-coding downstream 71300 5181158 ~ 5284057 (+)
G2290455 NA other upstream 560727 4546904 ~ 4548844 (+)
G2290395 NA other upstream 660000 4448889 ~ 4449571 (+)
G2289325 NA other upstream 2048792 3060442 ~ 3060779 (+)
G2288814 NA other upstream 2728176 2380447 ~ 2381395 (+)
G2291194 NA other downstream 306974 5416832 ~ 5418238 (+)
G2291219 NA other downstream 361705 5471563 ~ 5472153 (+)
wipf3 NA other downstream 614466 5724270 ~ 5749736 (+)
G2291490 NA other downstream 1037966 6147824 ~ 6148246 (+)

Expression


Co-expression Network