G2290967


Basic Information

Item Value
gene id G2290967
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 5120546 ~ 5120936 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2619980
gtctgtgtgagtggagaAAGTAGGTTCCCTAGAGAGGGGTCTGTGTGAGTGGGGAAAGTAGGTTCCCTAGAGAGGGGTCTGTGTGAGTGGGGAAAGTAGGTTCCCTAGCGagttgtctgtgtgagtggagaAAGTAGGTTCCCTAGAGAGGGGTCTGTGTGAGTGGAGAAAGTAGGTTCCCTAGAGAGGGGTCTGTGTGAGTGGAGAAAGTAGGTTCCCTAGAGAGGGGTCTGTGTGAGTGGAGAAAGTAGGTTCCCTAGAGAGGGGTCTGTGTGAGTGGAGAAAGTAGGTTCCTTAGAGAGGGGTCTGTGTGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2619980 True 315 lncRNA 0.53 3 5120546 5120936

Neighbor

gene id symbol gene type direction distance location
smim12 smim12 coding upstream 102598 5014549 ~ 5018314 (+)
pef1 pef1 coding upstream 108742 5002978 ~ 5011804 (+)
LOC118946537 NA coding upstream 1938746 3160218 ~ 3181800 (+)
angpt2b LOC106570762 coding upstream 2128458 2930144 ~ 2992088 (+)
LOC110487826 znf519 coding upstream 2233762 2883928 ~ 2886784 (+)
dlgap3 dlgap3 coding downstream 174873 5113201 ~ 5412625 (+)
LOC110513117 LOC106589108 coding downstream 388065 5509001 ~ 5525069 (+)
LOC110489357 slc6a19 coding downstream 471176 5592112 ~ 5615373 (+)
slc6a18 LOC106570711 coding downstream 511361 5632297 ~ 5641547 (+)
LOC110489437 LOC106570711 coding downstream 524247 5645183 ~ 5677904 (+)
G2290955 NA non-coding upstream 10688 5109571 ~ 5109858 (+)
G2290938 NA non-coding upstream 25364 5094972 ~ 5095182 (+)
G2290933 NA non-coding upstream 35454 5084836 ~ 5085092 (+)
G2290872 NA non-coding upstream 106813 5013435 ~ 5013733 (+)
G2290867 NA non-coding upstream 107888 5012224 ~ 5012658 (+)
G2290970 NA non-coding downstream 1690 5122626 ~ 5123090 (+)
G2290994 NA non-coding downstream 49476 5170412 ~ 5171309 (+)
G2291000 NA non-coding downstream 60222 5181158 ~ 5284057 (+)
G2291016 NA non-coding downstream 78540 5199476 ~ 5200039 (+)
G2291025 NA non-coding downstream 92467 5213403 ~ 5215647 (+)
G2290455 NA other upstream 571702 4546904 ~ 4548844 (+)
G2290395 NA other upstream 670975 4448889 ~ 4449571 (+)
G2289325 NA other upstream 2059767 3060442 ~ 3060779 (+)
G2288814 NA other upstream 2739151 2380447 ~ 2381395 (+)
G2291194 NA other downstream 295896 5416832 ~ 5418238 (+)
G2291219 NA other downstream 350627 5471563 ~ 5472153 (+)
wipf3 NA other downstream 603388 5724270 ~ 5749736 (+)
G2291490 NA other downstream 1026888 6147824 ~ 6148246 (+)

Expression


Co-expression Network