XLOC_004177 (ece1)


Basic Information

Item Value
gene id XLOC_004177
gene name ece1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 27919702 ~ 28050559 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00007988
CAGCACTGTCCCGAAAAATGTTGAGCTCTTTCATCGTCGTCCAGCATGTGGAATATTAGAAACAGGTGTCCTTTTACTCCGTGCCCTATTTCTTTGTAGAAATTTAAAGAAGTTTGAAGTACATTTCCCTCAGATGTCTACTTATAAACGGGCCACGCTGGAGGAAGAGGAGCTGTTGGACACCGGTTCTGATGGGATCTACCACACCTCTAGCATGCAGGTTGGTGTACAGCGTGGTCTGGGTCTCAGATGCTGGGCAGAAAAAACCCACTCCGAGAGAAAACTTGTGGTCCTTGTGTGCGCTCTTTCTGTGGCTCTGTTCATCTGCATCATGTCTTTGGGTCTGCACTATAAAGAATCTCATCCAGGTCTGTGCCTGTCGGAGCCATGTGTGAGTGTAGCCAGTGCAGTTCTGGGGTCTCTCGACCGGTCGGTGGACCCCTGCCAGGACTTTTATAACTTCGCATGTGGAGGCTGGATGAGGAAAAACCCCCTGCCTGAGGGCAAGTCCCGCTGGGGGCCTTTCAGCAACCTGTGGGAACATAACATGGCTGTCATGAAGAACTTGCTAGAGAACACCAGCATGAAAAGcttgagcagagcagagcagaaaGCCCAGTGGTATTACCAAGCCTGCATGAACGAGAGCAAAATTGAAGAGCTTGGAGCAAAACCACTCCAGGACCTCATCAATCAGACGGGAGGCTGGGGCTTGAAAGGCCCGTGGGAGAAGGATAACTTCCAGGAGGTTTTACGGATTGTGTCAGCCAACTTCCGAACCTCTCCCTTTTTCACTGTTTTTGTCAGCACAGACTCAAAAAGCTCCAACAGCAACATCATACAGGTGGATCAGTCAGGATTGGGACTCCCCTCTAGGGAATACTATCTCAATAAGACCGCCAATGAAAAGTATTTAAATGCTTACTTGAACTTTTTGGTGGAACTTGGAGTCCTCTTGGGCGGCTCACAGGACACCTCGCAGAAAATGATGGAGGAGATCATCGAGTTTGAAACCACCCTGGCAAACATTACTGTGCCTCAGGTGGAGCGACGGGATGAggagaaaatatattataaaatccAAGCCAAAGAGTTGGCGACATTGGCTCCTGCCATAGACTGGATGCCTTTCCTGTCTTCTGTTTTTGCCCCGGTTGAACTAAATGATTCTGAACCTGTGGTCGTATACGCTAAAGAATACCTCCAGAAAGTCTCCGAGCTCATCAGCAACACAAACAAAAGTGTCTTAAACAACTACATGATCATGAAAGTGGTGCGGAAAATGGTGTCCATCTTAGACCAGAAGTTCCAGGATGCAGAGCAGCGTTTCCTTGAAGTCATGTACGGCACCAAGAAGAGCTGCATGCCACGCTGGAAACTTTGCGTCAGCGACACGGACAGCGCTCTGGGCTTTGCTCTCGGGGCGCTCTTTGTCAAAGCTACTTTTTCCGAAGACAGCAAAGCTTTTGTTGAAGATATGGTCTCCGAGATCAAATGGGCCTTTGAAGACAGCTTGAAGACTGTCAGCTGGATGGATCCCGAGACAAAAAAAGCAGCCAAAGAAAAGGCTGATGCAATATACAACATGGTGGGTTATCCAAAATTTATTATGAACCCCAAAGAGCTGGACAAGGTGTTTAATGATTTTGATGTTGTTTCAGATCTCTACTttcaaaatgtcatgaattattACAACTTCTCTGCACGAGTGACTGCTGACCAGCTGAGAAAAGCCCCCAACAGAGATCAATGGAGTATGACTCCACCTACTGTCAATGCCTACTACAACCCGACAAAGAATGAGATGGTTCTTCCTGCAGGCATTTTCCAGGCTCCCTTTTACAACCACGCTTGGCCAAAAGCCATGAATTTCGGTGGGATAGGTGTGGTTATGGGGCACGAACTCACCCATGCTTTTGATGATCAAGGACGCAAATATGACAAGGATGGAAATCTTGCAAAATGGTGGCAAAATTCGTCAGTGGAAGCTTTTCAACACCAGACCCAGTGCATGGTGGAGCAATACAGCAACTACAGTATTAACAATGAACCCCTGAATGGAAAACACACTTTGGGAGAAAACATCGCTGACAACGGAGGCCTGAATGCGGCTTACAAGGCTTATGTAAACTGGATCAAGAAGAACGGCGAGGAGGCCAGTCTGCCTGCCCTTGGGATGAAcaaccatcaactgttttttgtGGGATTTGCTcagGTGTGGTGCTCTGTACGGACTCCTGAAAGCTCTCACGAGGGCGTCATCACTGACCCTCACAGTCCTTCACGCTTCCGGGTCATCGGCACCATCTCCAATTCTCACGAATTCTCTGAGCACTTCGGCTGTAAGGCAGATTCACCCATGAACCCTAAACGCAAGTGTGAGCTTTGGTGACAGTGAGATTGAACCTGGAGCAGTTACCCTGCAAAAAATATGCCAAACGTCTGTCTCAGGTTACCTCATATTGACTGCCAGGTCACTGACAGTGGACTTATTTTCCCGCCTCTTAATGGGAAGCTGGTGTAAATAGAGACTCCATGGACATCTATATAATGGAGTTTTATTCTTCTCGAAACACTGGAAGTTAGTGCTATAATGTAATAGGAAGGAATTGTGCTTTTTGCTGGTGTTTTCTTTGAATACATGCCTTTTATAagcaaatgcttttatttttttattgggaAATACTATTTATGTTCTCTGTGATATGTTGTGGGGGATTGTTTGATTTCTTTTCAACTGTAATGTTCGCCAATTCTTACACAACATCAATAACATCACTCACATTTTGAAACACGTGTTTGGTCCAACACATACTATCTGTACAATTTGCCTGTGCAATATGTGAAGCTGATTTTGGGTGAATGATCAGATTGTAAATGAAGAATGTATATGTGAGCAGTATACACACAGTTTAATTGGGTTTATTTTTGTACTGCATTATACGAAAGTGGATAGTtcagctaaaaatgaaaatgctgacATAAGTTACTCACctctgaacacaaaggaagatatttttaagaatgctggAATGTGGTACCATTGACATAGTATTTTTCAACCATGGATGCTAATGGTTACCAttctccagcattcttcaaattattttctttttttgtcaagGGAAATGAAAATTCATAAAGATTTGAATCCATATGAGGATGAGTGCAGTTTTGTTTTGATGTGAGCCATCACTTTAAGGCACCTTTTCATGGCTGATTTAAATGTTCATTGAAAGTGTTCAAGTCATAAATAACTTTATATTCAGTAAAATATTCAGGATTTGTCATTA
>TCONS_00007989
ATGTCTACTTATAAACGGGCCACGCTGGAGGAAGAGGAGCTGTTGGACACCGGTTCTGATGGGATCTACCACACCTCTAGCATGCAGGTTGGTGTACAGCGTGGTCTGGGTCTCAGATGCTGGGCAGAAAAAACCCACTCCGAGAGAAAACTTGTGGTCCTTGTGTGCGCTCTTTCTGTGGCTCTGTTCATCTGCATCATGTCTTTGGGTCTGCACTATAAAGAATCTCATCCAGGTCTGTGCCTGTCGGAGCCATGTGTGAGTGTAGCCAGTGCAGTTCTGGGGTCTCTCGACCGGTCGGTGGACCCCTGCCAGGACTTTTATAACTTCGCATGTGGAGGCTGGATGAGGAAAAACCCCCTGCCTGAGGGCAAGTCCCGCTGGGGGCCTTTCAGCAACCTGTGGGAACATAACATGGCTGTCATGAAGAACTTGCTAGAGAACACCAGCATGAAAAGcttgagcagagcagagcagaaaGCCCAGTGGTATTACCAAGCCTGCATGAACGAGAGCAAAATTGAAGAGCTTGGAGCAAAACCACTCCAGGACCTCATCAATCAGACGGGAGGCTGGGGCTTGAAAGGCCCGTGGGAGAAGGATAACTTCCAGGAGGTTTTACGGATTGTGTCAGCCAACTTCCGAACCTCTCCCTTTTTCACTGTTTTTGTCAGCACAGACTCAAAAAGCTCCAACAGCAACATCATACAGGTGGATCAGTCAGGATTGGGACTCCCCTCTAGGGAATACTATCTCAATAAGACCGCCAATGAAAAGTATTTAAATGCTTACTTGAACTTTTTGGTGGAACTTGGAGTCCTCTTGGGCGGCTCACAGGACACCTCGCAGAAAATGATGGAGGAGATCATCGAGTTTGAAACCACCCTGGCAAACATTACTGTGCCTCAGGTGGAGCGACGGGATGAggagaaaatatattataaaatccAAGCCAAAGAGTTGGCGACATTGGCTCCTGCCATAGACTGGATGCCTTTCCTGTCTTCTGTTTTTGCCCCGGTTGAACTAAATGATTCTGAACCTGTGGTCGTATACGCTAAAGAATACCTCCAGAAAGTCTCCGAGCTCATCAGCAACACAAACAAAAGTGTCTTAAACAACTACATGATCATGAAAGTGGTGCGGAAAATGGTGTCCATCTTAGACCAGAAGTTCCAGGATGCAGAGCAGCGTTTCCTTGAAGTCATGTACGGCACCAAGAAGAGCTGCATGCCACGCTGGAAACTTTGCGTCAGCGACACGGACAGCGCTCTGGGCTTTGCTCTCGGGGCGCTCTTTGTCAAAGCTACTTTTTCCGAAGACAGCAAAGCTTTTGTTGAAGATATGGTCTCCGAGATCAAATGGGCCTTTGAAGACAGCTTGAAGACTGTCAGCTGGATGGATCCCGAGACAAAAAAAGCAGCCAAAGAAAAGGCTGATGCAATATACAACATGGTGGGTTATCCAAAATTTATTATGAACCCCAAAGAGCTGGACAAGGTGTTTAATGATTTTGATGTTGTTTCAGATCTCTACTttcaaaatgtcatgaattattACAACTTCTCTGCACGAGTGACTGCTGACCAGCTGAGAAAAGCCCCCAACAGAGATCAATGGAGTATGACTCCACCTACTGTCAATGCCTACTACAACCCGACAAAGAATGAGATGGTTCTTCCTGCAGGCATTTTCCAGGCTCCCTTTTACAACCACGCTTGGCCAAAAGCCATGAATTTCGGTGGGATAGGTGTGGTTATGGGGCACGAACTCACCCATGCTTTTGATGATCAAGGACGCAAATATGACAAGGATGGAAATCTTGCAAAATGGTGGCAAAATTCGTCAGTGGAAGCTTTTCAACACCAGACCCAGTGCATGGTGGAGCAATACAGCAACTACAGTATTAACAATGAACCCCTGAATGGAAAACACACTTTGGGAGAAAACATCGCTGACAACGGAGGCCTGAATGCGGCTTACAAGGCTTATGTAAACTGGATCAAGAAGAACGGCGAGGAGGCCAGTCTGCCTGCCCTTGGGATGAAcaaccatcaactgttttttgtGGGATTTGCTcagGTGTGGTGCTCTGTACGGACTCCTGAAAGCTCTCACGAGGGCGTCATCACTGACCCTCACAGTCCTTCACGCTTCCGGGTCATCGGCACCATCTCCAATTCTCACGAATTCTCTGAGCACTTCGGCTGTAAGGCAGATTCACCCATGAACCCTAAACGCAAGTGTGAGCTTTGGTGACAGTGAGATTGAACC
>TCONS_00007990
ACTGACTTGACGTCGTTTGATACAATACGTCCACCAGAAAGTGTACAGCTGTCTagcaagagagagaaagagaaagagagagaagagagataCATGCTATGATGTCTACTTATAAACGGGCCACGCTGGAGGAAGAGGAGCTGTTGGACACCGGTTCTGATGGGATCTACCACACCTCTAGCATGCAGGTTGGTGTACAGCGTGGTCTGGGTCTCAGATGCTGGGCAGAAAAAACCCACTCCGAGAGAAAACTTGTGGTCCTTGTGTGCGCTCTTTCTGTGGCTCTGTTCATCTGCATCATGTCTTTGGGTCTGCACTATAAAGAATCTCATCCAGGTCTGTGCCTGTCGGAGCCATGTGTGAGTGTAGCCAGTGCAGTTCTGGGGTCTCTCGACCGGTCGGTGGACCCCTGCCAGGACTTTTATAACTTCGCATGTGGAGGCTGGATGAGGAAAAACCCCCTGCCTGAGGGCAAGTCCCGCTGGGGGCCTTTCAGCAACCTGTGGGAACATAACATGGCTGTCA

Function

symbol description
ece1 Predicted to enable metalloendopeptidase activity. Acts upstream of or within embryonic viscerocranium morphogenesis. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in plasma membrane. Is expressed in cardiovascular system; fin bud; hindbrain; pharyngeal arch; and somite. Human ortholog(s) of this gene implicated in Alzheimer's disease; coronary artery disease; essential hypertension; and hypertension. Orthologous to human ECE1 (endothelin converting enzyme 1).

GO:

id name namespace
GO:0006508 proteolysis biological_process
GO:0048703 embryonic viscerocranium morphogenesis biological_process
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0004222 metalloendopeptidase activity molecular_function
GO:0008237 metallopeptidase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-061110-100 Predicted to enable metalloendopeptidase activity. Acts upstream of or within embryonic viscerocranium morphogenesis. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in plasma membrane. Is expressed in cardiovascular system; fin bud; hindbrain; pharyngeal arch; and somite. Human ortholog(s) of this gene implicated in Alzheimer's disease; coronary artery disease; essential hypertension; and hypertension. Orthologous to human ECE1 (endothelin converting enzyme 1).

Ensembl:

ensembl_id ENSDARG00000061737

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00007988 False 3293 mRNA 0.44 19 27919702 28050559
TCONS_00007989 False 2274 mRNA 0.48 18 27920588 27953135
TCONS_00007990 True 525 mRNA 0.52 4 27939882 27962757

Neighbor

gene id symbol gene type direction distance location
XLOC_004176 eif4g3a coding downstream 1972 27828212 ~ 27917730 (-)
XLOC_004175 cstf1 coding downstream 92169 27817301 ~ 27827533 (-)
XLOC_004174 NA coding downstream 109987 27800859 ~ 27809715 (-)
XLOC_004173 BX601648.1 coding downstream 112935 27783758 ~ 27806767 (-)
XLOC_004172 cass4 coding downstream 140871 27745618 ~ 27778831 (-)
XLOC_004178 si:ch211-220m17.4 coding upstream 2140 28052699 ~ 28086924 (-)
XLOC_004179 lactbl1b coding upstream 76640 28127199 ~ 28390101 (-)
XLOC_004180 NA coding upstream 146398 28196957 ~ 28200504 (-)
XLOC_004181 NA coding upstream 368317 28418876 ~ 28424141 (-)
XLOC_004182 NA coding upstream 463183 28513742 ~ 28522344 (-)
XLOC_004063 CR854846.1 misc downstream 11792024 16127382 ~ 16127678 (-)
XLOC_004019 CR450764.8 misc downstream 15228011 12691395 ~ 12691691 (-)
XLOC_004015 CR450764.4 misc downstream 15297935 12621518 ~ 12621767 (-)
XLOC_004013 CABZ01022569.1 misc downstream 15328406 12590999 ~ 12591296 (-)
XLOC_004008 BX000700.19 misc downstream 15406440 12512966 ~ 12513262 (-)
XLOC_004169 NA non-coding downstream 294237 27543578 ~ 27625465 (-)
XLOC_004167 NA non-coding downstream 411729 27502205 ~ 27507973 (-)
XLOC_004165 CR847934.1 non-coding downstream 1171273 26748292 ~ 26748429 (-)
XLOC_004183 BX649345.1 non-coding upstream 471805 28522364 ~ 28525496 (-)
XLOC_004187 NA non-coding upstream 1034807 29085366 ~ 29088626 (-)

Expression


Co-expression Network