G2291049


Basic Information

Item Value
gene id G2291049
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 5285564 ~ 5286330 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2620075
tgggggggggataaTTATTAGAGATTCTTTAAGGCTGTTTGTCAGCAGAACCCTAAATCTTAGGCTGTCGTGATTGGCACCAATAACCTATGTAAGGCCTGTATCAATAGACTACCAGTTGCATTTATTTGATATGAATAGGAGACAGAAAAGTGAGCTGACCAGATTAGGAAAGTTGCAAAGTGTCCAGACCACTGACTGACCAGTAAACTAGgtgttAATTATAACCAATCATCTGCAACCATTAGAAACACAtcaacaccttatggaacaaaaacaaactaaaagtatttacaaaaaacaacaaaaagtattgacaaaaaaaaactacaaaaagTATAGACAAAAAAACTACAAAAATGattgacaaaaaaacaacaaaaagtaTAGAAAAAAGAACAACAAAAAGTATTGACAAAAAAACTACAAAAAGTATTGACAAAAGAACTACAAAAAAGTATTTCTGAGTCTATAAGATTAACGTCAGCATCGCTTTTATCGAACGTTCAGTTTTCATGAGCTCACAAATCCAAAATGGCGCTTCCACCCGAAAGAGTTACCTGGCCTTAACTTGATTCGtcaattatgtattttttttcaatAGGCTAATTATGCCTGGGCCAATAGGCCTAATTGTTCGATGAGCATTTTTGTATCCAGCTGTTTAGTTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2620075 True 671 lncRNA 0.34 2 5285564 5286330

Neighbor

gene id symbol gene type direction distance location
smim12 smim12 coding upstream 267616 5014549 ~ 5018314 (+)
pef1 pef1 coding upstream 273760 5002978 ~ 5011804 (+)
LOC118946537 NA coding upstream 2103764 3160218 ~ 3181800 (+)
angpt2b LOC106570762 coding upstream 2293476 2930144 ~ 2992088 (+)
LOC110487826 znf519 coding upstream 2398780 2883928 ~ 2886784 (+)
dlgap3 dlgap3 coding downstream 9479 5113201 ~ 5412625 (+)
LOC110513117 LOC106589108 coding downstream 222671 5509001 ~ 5525069 (+)
LOC110489357 slc6a19 coding downstream 305782 5592112 ~ 5615373 (+)
slc6a18 LOC106570711 coding downstream 345967 5632297 ~ 5641547 (+)
LOC110489437 LOC106570711 coding downstream 358853 5645183 ~ 5677904 (+)
G2291000 NA non-coding upstream 1507 5181158 ~ 5284057 (+)
G2291025 NA non-coding upstream 69917 5213403 ~ 5215647 (+)
G2291016 NA non-coding upstream 85525 5199476 ~ 5200039 (+)
G2290994 NA non-coding upstream 114255 5170412 ~ 5171309 (+)
G2290970 NA non-coding upstream 162474 5122626 ~ 5123090 (+)
G2291078 NA non-coding downstream 64980 5351310 ~ 5354393 (+)
G2291082 NA non-coding downstream 76990 5363320 ~ 5365258 (+)
G2291186 NA non-coding downstream 93747 5380077 ~ 5380283 (+)
G2291198 NA non-coding downstream 99035 5385365 ~ 5386056 (+)
G2291193 NA non-coding downstream 126356 5412686 ~ 5413092 (+)
G2290455 NA other upstream 736720 4546904 ~ 4548844 (+)
G2290395 NA other upstream 835993 4448889 ~ 4449571 (+)
G2289325 NA other upstream 2224785 3060442 ~ 3060779 (+)
G2288814 NA other upstream 2904169 2380447 ~ 2381395 (+)
G2291194 NA other downstream 130502 5416832 ~ 5418238 (+)
G2291219 NA other downstream 185233 5471563 ~ 5472153 (+)
wipf3 NA other downstream 437994 5724270 ~ 5749736 (+)
G2291490 NA other downstream 861494 6147824 ~ 6148246 (+)

Expression


Co-expression Network