Gene
RNA
| Item | Value |
|---|---|
| gene id | G2291078 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050572.1 |
| NCBI id | CM025859.1 |
| chromosome length | 41837469 |
| location | 5351310 ~ 5354393 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2620104 | False | 301 | lncRNA | 0.43 | 3 | 5351310 | 5353698 |
| TU2620105 | False | 263 | lncRNA | 0.42 | 2 | 5351310 | 5353698 |
| TU2620106 | True | 502 | lncRNA | 0.41 | 2 | 5351310 | 5354393 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| smim12 | smim12 | coding | upstream | 333362 | 5014549 ~ 5018314 (+) |
| pef1 | pef1 | coding | upstream | 339506 | 5002978 ~ 5011804 (+) |
| LOC118946537 | NA | coding | upstream | 2169510 | 3160218 ~ 3181800 (+) |
| angpt2b | LOC106570762 | coding | upstream | 2359222 | 2930144 ~ 2992088 (+) |
| LOC110487826 | znf519 | coding | upstream | 2464526 | 2883928 ~ 2886784 (+) |
| LOC110513117 | LOC106589108 | coding | downstream | 154608 | 5509001 ~ 5525069 (+) |
| LOC110489357 | slc6a19 | coding | downstream | 237719 | 5592112 ~ 5615373 (+) |
| slc6a18 | LOC106570711 | coding | downstream | 277904 | 5632297 ~ 5641547 (+) |
| LOC110489437 | LOC106570711 | coding | downstream | 290790 | 5645183 ~ 5677904 (+) |
| wipf3 | NA | coding | downstream | 369877 | 5724270 ~ 5749736 (+) |
| G2291049 | NA | non-coding | upstream | 64980 | 5285564 ~ 5286330 (+) |
| G2291000 | NA | non-coding | upstream | 67253 | 5181158 ~ 5284057 (+) |
| G2291025 | NA | non-coding | upstream | 135663 | 5213403 ~ 5215647 (+) |
| G2291016 | NA | non-coding | upstream | 151271 | 5199476 ~ 5200039 (+) |
| G2290994 | NA | non-coding | upstream | 180001 | 5170412 ~ 5171309 (+) |
| G2291082 | NA | non-coding | downstream | 8927 | 5363320 ~ 5365258 (+) |
| G2291186 | NA | non-coding | downstream | 25684 | 5380077 ~ 5380283 (+) |
| G2291198 | NA | non-coding | downstream | 30972 | 5385365 ~ 5386056 (+) |
| G2291193 | NA | non-coding | downstream | 58293 | 5412686 ~ 5413092 (+) |
| G2291192 | NA | non-coding | downstream | 61783 | 5416176 ~ 5416762 (+) |
| G2290455 | NA | other | upstream | 802466 | 4546904 ~ 4548844 (+) |
| G2290395 | NA | other | upstream | 901739 | 4448889 ~ 4449571 (+) |
| G2289325 | NA | other | upstream | 2290531 | 3060442 ~ 3060779 (+) |
| G2288814 | NA | other | upstream | 2969915 | 2380447 ~ 2381395 (+) |
| dlgap3 | dlgap3 | other | downstream | 30258 | 5113201 ~ 5412625 (+) |
| G2291194 | NA | other | downstream | 62439 | 5416832 ~ 5418238 (+) |
| G2291219 | NA | other | downstream | 117170 | 5471563 ~ 5472153 (+) |
| G2291490 | NA | other | downstream | 793431 | 6147824 ~ 6148246 (+) |
