G2291192


Basic Information

Item Value
gene id G2291192
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 5416176 ~ 5416762 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2620235
CTGGTCACATGTCTTCAGGGGTTAACTGGAAATTCGACGATGGAGTCACCCTGGAATCTAAAACAAGAACGTTTTCAACCAGGAGTTTCACCCAACTTCTACCAACTCTCCACAATAAGAAGGGAGGTGACCTAACTGTTCTGTTCCTACCTGTTGAGCTGAACCCTCTACCCGGGTCTACCTGATCACCTGATCTCAAGAGTACAGGTACAAACCCTAcaatcacaaacagacaaatggCACAGCAGCCAATGGGAGGAGGTTATTGTGTCCTAgtagctgcgtgtgtgtgtgtgcgtgtgtgtgtgcgtgcgtgcacgtgtgtgtgtgtgtgtgtgtgtggaaccaCACTGTGACGTCGACCTCTAGCAGGCTCAATTACAAACTCCCTCAGAACCTTCAAGCTATGGTTCAGAGATTACTGAGCAATACCCTGCTTACCACAACCACACTTACTACATGTAAATATCTCTTCATTTACTCTCTTTAATCTTGTTATTACAatgactattattattattattattattgctacaGCATTACTATGGAATATTACGATCACTGTCATTATTATCACGTGTTTGTTA

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU2620235 True 587 lncRNA 0.43 1 5416176 5416762

Neighbor

gene id symbol gene type direction distance location
dlgap3 dlgap3 coding upstream 3551 5113201 ~ 5412625 (+)
smim12 smim12 coding upstream 398228 5014549 ~ 5018314 (+)
pef1 pef1 coding upstream 404372 5002978 ~ 5011804 (+)
LOC118946537 NA coding upstream 2234376 3160218 ~ 3181800 (+)
angpt2b LOC106570762 coding upstream 2424088 2930144 ~ 2992088 (+)
LOC110513117 LOC106589108 coding downstream 92239 5509001 ~ 5525069 (+)
LOC110489357 slc6a19 coding downstream 175350 5592112 ~ 5615373 (+)
slc6a18 LOC106570711 coding downstream 215535 5632297 ~ 5641547 (+)
LOC110489437 LOC106570711 coding downstream 228421 5645183 ~ 5677904 (+)
wipf3 NA coding downstream 307508 5724270 ~ 5749736 (+)
G2291193 NA non-coding upstream 3084 5412686 ~ 5413092 (+)
G2291198 NA non-coding upstream 30120 5385365 ~ 5386056 (+)
G2291186 NA non-coding upstream 35893 5380077 ~ 5380283 (+)
G2291082 NA non-coding upstream 50918 5363320 ~ 5365258 (+)
G2291078 NA non-coding upstream 61783 5351310 ~ 5354393 (+)
G2291194 NA non-coding downstream 70 5416832 ~ 5418238 (+)
G2291213 LOC106570718 non-coding downstream 35891 5452653 ~ 5466304 (+)
G2291215 NA non-coding downstream 44979 5461741 ~ 5462301 (+)
G2291218 NA non-coding downstream 53701 5470463 ~ 5471514 (+)
G2291206 NA non-coding downstream 118595 5535357 ~ 5535923 (+)
G2290455 NA other upstream 867332 4546904 ~ 4548844 (+)
G2290395 NA other upstream 966605 4448889 ~ 4449571 (+)
G2289325 NA other upstream 2355397 3060442 ~ 3060779 (+)
G2291219 NA other downstream 54801 5471563 ~ 5472153 (+)
G2291490 NA other downstream 731062 6147824 ~ 6148246 (+)
G2291498 NA other downstream 744316 6161078 ~ 6161719 (+)

Expression


Co-expression Network