G2291194


Basic Information

Item Value
gene id G2291194
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 5416832 ~ 5418238 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2620241
TTTGTAAAGTGAAGTCAAAATAAATCTGTCTTTCTAGAAGATCCTCTAATTGCTGCTACTGTAGATGAGCAACAGATTTGAACGAAAAATGAGAGGACATCTTTTTTAGAAGAGAAGTAAGTGTTTCTGATTTTCCATCCGGTCTCTCCTCCAGTAGTTGATGAACAAACAGATGGATGGACAGAATGGATCCAGACTGAGGGCTCTTGTTGAAGACCAACAGACCTCTTCCATGGACAATGTAGTGCCCTTAACCAAACACCTAGCAACACCCTTACCCAAACACCTAGCAACACCCTTACCCAAACACCTAGCAACACCCTTACCCAAACACCTAGCAACACCCTTACCCAAACACCTAGCAACACCCTTACCCAAACACCTAGCAACACCCTTAACCAAACACCTAGCAACACCCTTAACCAAACACCTAGCAACACCCTTACCCAAACACCAAACACCTAGCAACACCCTTAACCAAACACCTAGCAACACCCTTAACCAAACACCTAGCAACACCCTTACCCAAACACCTAGCAACACCCTTAACCAAACACCTAGCAACACCCTTAACCAAACACCAAACACCTAGCAACACCCTTACCCAAACACCAAACAGCTAGCAACACCCTTAACCAAACACCTAGCAACACCCTTAACCAAACACGTAGCAACACCCTTAACCAAACACCTAGCAACACCCTTAACCAAACACCAAACACCTAGCAACACCCTTAACCAAACACCTAGCAACACCCTTACCCAAACACATAGCAACACCCTTAACCAAACACCTGGCATCACCCTTAGCCAAACACCTAGCAACACTCTTACCCAAACACCTGGCATCACCCTTAGCCAAACACCTAGCAACCTCCTCTTTCcattttcctttctctctcacttctcaCATACAGACGAACAGCACGGTTCCTCAACGGACAGGCTTCTACAGAAACTATTTCTTTCCTTGACTCATTGTATTGCT
>TU2620242
TTTGTAAAGTGAAGTCAAAATAAATCTGTCTTTCTAGAAGATCCTCTAATTGCTGCTACTGTAGATGAGCAACAGATTTGAACGAAAAATGAGAGGACATCTTTTTTAGAAGAGAAGTAAGTGTTTCTGATTTTCCATCCGGTCTCTCCTCCAGTAGTTGATGAACAAACAGATGGATGGACAGAATGGATCCAGACTGAGGGCTCTTGTTGAAGACCAACAGACCTCTTCCATGGACAATGTAGTGCCCTTAACCAAACACCTAGCAACACCCTTACCCAAACACCTAGCAACACCCTTACCCAAACACCAAACACCTAGCAACACCCTTACCCAAACACATAGCAACACCCTTAACCAAACACCTGGCATCACCCTTAGCCAAACACCTAGCAACACTCTTACCCAAACACCAAACACATAGCATCACCCTTACCCAAACACCAAACACCTGGCATCACCCTTAGCCAAACACCTAGCAACCTCCTCTTTCcattttcctttctctctcacttctcaCATACAGACGAACAGCACGGTTCCTCAACGGACAGGCTTCTACAGAAACTATTTCTTTCCTTGACTCATTGTATTGCT
>TU2620244
TTTGTAAAGTGAAGTCAAAATAAATCTGTCTTTCTAGAAGATCCTCTAATTGCTGCTACTGTAGATGAGCAACAGATTTGAACGAAAAATGAGAGGACATCTTTTTTAGAAGAGAAGTAAGTGTTTCTGATTTTCCATCCGGTCTCTCCTCCAGTAGTTGATGAACAAACAGATGGATGGACAGAATGGATCCAGACTGAGGGCTCTTGTTGAAGACCAACAGACCTCTTCCATGGACAATGTAGTGCCCTTAACCAAACACCTAGCAACACCCTTACCCAAACACCTAGCAACACCCTTACCCAAACACCTAGCAACACCCTTACCCAAACACCTAGCAACACCCTTACCCAAACACCTAGCAACACCCTTACCCAAACACCTAGCAACACCCTTAACCAAACACCTAGCAACACCCTTAACCAAACACCTAGCAACACCCTTACCCAAACACCAAACACCTAGCAACACCCTTAACCAAACACCTAGCAACACCCTTAACCAAACACCTAGCAACACCCTTACCCAAACACCTAGCAACACCCTTAACCAAACACCTAGCAACACCCTTAACCAAACACCAAACACCTAGCAACACCCTTACCCAAACACCAAACAGCTAGCAACACCCTTAACCAAACACCTAGCAACACCCTTAACCAAACACCAAACACCTAGCAACACCCTTAACCAAACACCTAGCAACACCCTTACCCAAACACATAGCAACACCCTTAACCAAACACCTGGCATCACCCTTAGCCAAACACCTAGCAACACCCTTACCCAAACACCAAACACATAGCATCACCCTTACCCAAACACCAAACACCTGGCATCACCCTTAGCCAAACACCTAGCAACCTCCTCTTTCcattttcctttctctctcacttctcaCATACAGACGAACAGCACGGTTCCTCAACGGACAGGCTTCTACAGAAACTATTTCTTTCCTTGACTCATTGTATTGCT

Function

NR:

description
PREDICTED: uncharacterized protein LOC106576983 isoform X4

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2620241 False 988 TUCP 0.45 2 5416832 5418238
TU2620242 False 597 lncRNA 0.44 3 5416832 5418238
TU2620244 True 978 TUCP 0.45 4 5416832 5418238

Neighbor

gene id symbol gene type direction distance location
dlgap3 dlgap3 coding upstream 4207 5113201 ~ 5412625 (+)
smim12 smim12 coding upstream 398884 5014549 ~ 5018314 (+)
pef1 pef1 coding upstream 405028 5002978 ~ 5011804 (+)
LOC118946537 NA coding upstream 2235032 3160218 ~ 3181800 (+)
angpt2b LOC106570762 coding upstream 2424744 2930144 ~ 2992088 (+)
LOC110513117 LOC106589108 coding downstream 90763 5509001 ~ 5525069 (+)
LOC110489357 slc6a19 coding downstream 173874 5592112 ~ 5615373 (+)
slc6a18 LOC106570711 coding downstream 214059 5632297 ~ 5641547 (+)
LOC110489437 LOC106570711 coding downstream 226945 5645183 ~ 5677904 (+)
wipf3 NA coding downstream 306032 5724270 ~ 5749736 (+)
G2291192 NA non-coding upstream 70 5416176 ~ 5416762 (+)
G2291193 NA non-coding upstream 3740 5412686 ~ 5413092 (+)
G2291198 NA non-coding upstream 30776 5385365 ~ 5386056 (+)
G2291186 NA non-coding upstream 36549 5380077 ~ 5380283 (+)
G2291082 NA non-coding upstream 51574 5363320 ~ 5365258 (+)
G2291213 LOC106570718 non-coding downstream 34415 5452653 ~ 5466304 (+)
G2291215 NA non-coding downstream 43503 5461741 ~ 5462301 (+)
G2291218 NA non-coding downstream 52225 5470463 ~ 5471514 (+)
G2291206 NA non-coding downstream 117119 5535357 ~ 5535923 (+)
G2291247 NA non-coding downstream 120545 5538783 ~ 5544500 (+)
G2290455 NA other upstream 867988 4546904 ~ 4548844 (+)
G2290395 NA other upstream 967261 4448889 ~ 4449571 (+)
G2289325 NA other upstream 2356053 3060442 ~ 3060779 (+)
G2291219 NA other downstream 53325 5471563 ~ 5472153 (+)
G2291490 NA other downstream 729586 6147824 ~ 6148246 (+)
G2291498 NA other downstream 742840 6161078 ~ 6161719 (+)
G2291541 NA other downstream 889898 6308136 ~ 6316697 (+)

Expression


Co-expression Network