G2291247


Basic Information

Item Value
gene id G2291247
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 5538783 ~ 5544500 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2620321
CAGTGTTCGGTATGATTTTAATTCATTCTACACCAGCTATGTGGGTCTGTACACAAAATACAGACATGATATGGAGGACAGACCAGTATTATAAAGTTAATGTTCGTAAAAACACACGTTGTGATTCACCTTTCAGTTAAAGTGTATTTAGAAACAAAATACAGACATTATACAGAAAAATCATGTTACAAAAAAACCCAGAAAGgcaaaaataataattgtgttcACTTGGTAGAAAACTACTTGACTTGATACTCATCTGAGGAAACCCACATTTAAAGCTTGTGTTTCCCGCGGTTACAATAGTGATACAGGAAGGAAGTGCCTATTAGACATCCTTCAGATAAATGTGTTGTGTGTTCCTGTGAGTCTCAGAACTCCTTGAGAGTGTCCCCTCCCTGAGGGTTTTCCAGCCAGTGTGGGGGCCAGGTAGCTTTAACACTGGGTCTGTCCTTCACCATATTGTAGTACGCTCCCAGTTTGGGGTAACGCGCCGTAGACAGCCCAAAGCGGAAGGCGTAGGCAATCACAGGGAAGACAATAACGTCAGCCAATGAGAAGGCTTTTCCTGCCAGGTAAGAACCCACCTCCGCcTTCTGAAAGTATCCCTCCCACAGTTTGATTTCAGCGGCCAGGTTCTCCTTGTTCCTCTTGATAGCggagtcatgtctctctccctcgggGACACGGTAGTTGTAGTAGATGACGTTACtgaGTTTGTCACTGAAGTTGAGGACCTCAAACATGCGCTGGTACATCAGGGCCTGCTCTAGTTGACCCTCAGGAATCAACTGGGGTCCCTGGGACCTGAACCGGCTCTCCAGGTACATGCATGCTGCATATGACTCGTTGAGTATGTTGTCTCCGTGTTTGAAAGCAGGGAGCTGTCCTCTGGGATTGATGTCCAGGACTTCTTTAGACTTGTGCTCTGCTTTCTCGAAGGACAGAAGTTTCTGATTGTATCCCTGCAGTTGCTTTTCCTCCAGAGCGATCATGACACGCCAGCACGGAGGAGAGCCGGAGCCCCAGAGAAGTGTCATGTCCTTGGCCATGATTGGAGACTCGACCGCAAAAGTAGAAATCGTTTTGTATGAGTGGCGAAAGA

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU2620321 True 1105 lncRNA 0.47 6 5538783 5544500

Neighbor

gene id symbol gene type direction distance location
LOC110513117 LOC106589108 coding upstream 13714 5509001 ~ 5525069 (+)
dlgap3 dlgap3 coding upstream 126158 5113201 ~ 5412625 (+)
smim12 smim12 coding upstream 520835 5014549 ~ 5018314 (+)
pef1 pef1 coding upstream 526979 5002978 ~ 5011804 (+)
LOC118946537 NA coding upstream 2356983 3160218 ~ 3181800 (+)
LOC110489357 slc6a19 coding downstream 47612 5592112 ~ 5615373 (+)
slc6a18 LOC106570711 coding downstream 87797 5632297 ~ 5641547 (+)
LOC110489437 LOC106570711 coding downstream 100683 5645183 ~ 5677904 (+)
wipf3 NA coding downstream 179770 5724270 ~ 5749736 (+)
LOC110489352 LOC106570724 coding downstream 274580 5819080 ~ 5856740 (+)
G2291206 NA non-coding upstream 2860 5535357 ~ 5535923 (+)
G2291218 NA non-coding upstream 67269 5470463 ~ 5471514 (+)
G2291213 LOC106570718 non-coding upstream 72479 5452653 ~ 5466304 (+)
G2291215 NA non-coding upstream 76482 5461741 ~ 5462301 (+)
G2291194 NA non-coding upstream 120545 5416832 ~ 5418238 (+)
G2291250 NA non-coding downstream 1480 5545980 ~ 5546898 (+)
G2291252 NA non-coding downstream 6677 5551177 ~ 5551427 (+)
G2291258 NA non-coding downstream 12467 5556967 ~ 5557302 (+)
G2291263 NA non-coding downstream 18830 5563330 ~ 5563603 (+)
G2291265 NA non-coding downstream 22474 5566974 ~ 5567294 (+)
G2291219 NA other upstream 66630 5471563 ~ 5472153 (+)
G2290455 NA other upstream 989939 4546904 ~ 4548844 (+)
G2291490 NA other downstream 603324 6147824 ~ 6148246 (+)
G2291498 NA other downstream 616578 6161078 ~ 6161719 (+)
G2291541 NA other downstream 763636 6308136 ~ 6316697 (+)
G2292347 NA other downstream 1337877 6882377 ~ 6883166 (+)

Expression


Co-expression Network