G2291250


Basic Information

Item Value
gene id G2291250
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 5545980 ~ 5546898 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2620333
gcaaaatctagatacctacaaatcagccgggctagacaatctggaccctctctaaatttatcagccaaaattgttgcaaaccctgttactagcctgttcaacctctctttcgtatcgtctgagaaccccaaagattggaaagctgccgtggtcaaccccctcttcaaagggggagacactctagacccaaactgctacagaccaatatttatcctaccatgcctttctaagttcttcgaaagccaagttaacaaacagatcaccgaccatttcgaatctcaccgtaccttctccactatgcaatctggtttctgagctggtcatgggtgcacctcagccacgctcaaggtcctaaacaatatcataacctccatcaataagagacaatactgtgcagctgtattcatcgacctggccaaggctttcgactctgtcaatcacaacattcttatcggcagactcaacagccttggtttctcaaatgactgcctcgcctggttcaccaactacttctcagacagagttcagtgtgtcaaattggagggcctattgtccagacctctggcaggctctaacaaagcctccttcactcatgctgccaaacatacccttgtaaaactgactatcctaccaattcttgacttcagcgatgtcatttacaaaatagcctccaacactctactcagcatattggatgcagtctatcacagtgacatccgttttgtcaccaaagccccatatactgcccaccactgcgacctgtatgctctcgttggctggccctcgcttcatattcgtcgccaaacccactggctccaggtcatctataagtctttgctaggtaaagccccgccttatctcagctcactggtcaccatagcagcacccacctgtagcacgcgattcagcaggtatatct

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2620333 True 919 lncRNA 0.47 1 5545980 5546898

Neighbor

gene id symbol gene type direction distance location
LOC110513117 LOC106589108 coding upstream 20911 5509001 ~ 5525069 (+)
dlgap3 dlgap3 coding upstream 133355 5113201 ~ 5412625 (+)
smim12 smim12 coding upstream 528032 5014549 ~ 5018314 (+)
pef1 pef1 coding upstream 534176 5002978 ~ 5011804 (+)
LOC118946537 NA coding upstream 2364180 3160218 ~ 3181800 (+)
LOC110489357 slc6a19 coding downstream 45214 5592112 ~ 5615373 (+)
slc6a18 LOC106570711 coding downstream 85399 5632297 ~ 5641547 (+)
LOC110489437 LOC106570711 coding downstream 98285 5645183 ~ 5677904 (+)
wipf3 NA coding downstream 177372 5724270 ~ 5749736 (+)
LOC110489352 LOC106570724 coding downstream 272182 5819080 ~ 5856740 (+)
G2291247 NA non-coding upstream 1480 5538783 ~ 5544500 (+)
G2291206 NA non-coding upstream 10057 5535357 ~ 5535923 (+)
G2291218 NA non-coding upstream 74466 5470463 ~ 5471514 (+)
G2291213 LOC106570718 non-coding upstream 79676 5452653 ~ 5466304 (+)
G2291215 NA non-coding upstream 83679 5461741 ~ 5462301 (+)
G2291252 NA non-coding downstream 4279 5551177 ~ 5551427 (+)
G2291258 NA non-coding downstream 10069 5556967 ~ 5557302 (+)
G2291263 NA non-coding downstream 16432 5563330 ~ 5563603 (+)
G2291265 NA non-coding downstream 20076 5566974 ~ 5567294 (+)
G2291266 NA non-coding downstream 20400 5567298 ~ 5567663 (+)
G2291219 NA other upstream 73827 5471563 ~ 5472153 (+)
G2291194 NA other upstream 127742 5416832 ~ 5418238 (+)
G2290455 NA other upstream 997136 4546904 ~ 4548844 (+)
G2291490 NA other downstream 600926 6147824 ~ 6148246 (+)
G2291498 NA other downstream 614180 6161078 ~ 6161719 (+)
G2291541 NA other downstream 761238 6308136 ~ 6316697 (+)
G2292347 NA other downstream 1335479 6882377 ~ 6883166 (+)

Expression


Co-expression Network