G2291286


Basic Information

Item Value
gene id G2291286
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 5628628 ~ 5629225 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2620371
acaggaggaggcaggtagctgggtccaggggcaggcagaaggtcatacacaggaggaggcaggtagctgggtccaggggcaggcagaagggcatacacaggaggaggcaggtagctgggtccaggggcaggcagaaggtcatacacaggaggaggcaggtagctgggtccgtGGGCAGGCAGAAGggcatacacaggaggaggcaggtagctgggtccaggggcagccagaaggtcatacacagggggtcca
>TU2620372
acaggaggaggcaggtagctgggtccaggggcaggcagaaggtcatacacaggaggaggcaggtagctgggtccaggggcaggcagaagggcatacacaggaggaggcaggtagctgggtccaggggcaggcagaagggcatacacaggaggaggcaggtagctgggtccaggggcagccagaaggtcatacacagggggtcca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2620371 False 252 lncRNA 0.63 2 5628628 5629225
TU2620372 True 204 lncRNA 0.64 3 5628628 5629225

Neighbor

gene id symbol gene type direction distance location
LOC110489357 slc6a19 coding upstream 13255 5592112 ~ 5615373 (+)
LOC110513117 LOC106589108 coding upstream 103559 5509001 ~ 5525069 (+)
dlgap3 dlgap3 coding upstream 216003 5113201 ~ 5412625 (+)
smim12 smim12 coding upstream 610680 5014549 ~ 5018314 (+)
pef1 pef1 coding upstream 616824 5002978 ~ 5011804 (+)
slc6a18 LOC106570711 coding downstream 3072 5632297 ~ 5641547 (+)
LOC110489437 LOC106570711 coding downstream 15958 5645183 ~ 5677904 (+)
wipf3 NA coding downstream 95045 5724270 ~ 5749736 (+)
LOC110489352 LOC106570724 coding downstream 189855 5819080 ~ 5856740 (+)
LOC110520219 NA coding downstream 417365 6046590 ~ 6047475 (+)
G2291266 NA non-coding upstream 60965 5567298 ~ 5567663 (+)
G2291265 NA non-coding upstream 61334 5566974 ~ 5567294 (+)
G2291263 NA non-coding upstream 65025 5563330 ~ 5563603 (+)
G2291258 NA non-coding upstream 71326 5556967 ~ 5557302 (+)
G2291252 NA non-coding upstream 77201 5551177 ~ 5551427 (+)
G2291311 NA non-coding downstream 68295 5697520 ~ 5697778 (+)
G2291312 NA non-coding downstream 69711 5698936 ~ 5699674 (+)
G2291313 NA non-coding downstream 70788 5700013 ~ 5700617 (+)
G2291321 NA non-coding downstream 90582 5719807 ~ 5720039 (+)
G2291338 LOC100286654 non-coding downstream 144625 5773850 ~ 5779668 (+)
G2291219 NA other upstream 156475 5471563 ~ 5472153 (+)
G2291194 NA other upstream 210390 5416832 ~ 5418238 (+)
G2290455 NA other upstream 1079784 4546904 ~ 4548844 (+)
G2291490 NA other downstream 518599 6147824 ~ 6148246 (+)
G2291498 NA other downstream 531853 6161078 ~ 6161719 (+)
G2291541 NA other downstream 678911 6308136 ~ 6316697 (+)
G2292347 NA other downstream 1253152 6882377 ~ 6883166 (+)

Expression


Co-expression Network