G2291338 (LOC100286654)


Basic Information

Item Value
gene id G2291338
gene name LOC100286654
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 5773850 ~ 5779668 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2620455
TGCCAGACAGCAtaatgttactgtgtgtgtgtgtgtgtgtgtgtgttctcgccTCGTCCTTGGAGAGTTTCCAGTCATCGTTGAGGTCCATTTCCTGGAAGGATTCATGTGACCTGGGTCCATTCCTGATCTCCATCACCTCGATGTTAAAAGTCAGGGTGCTCTCCGGTGGGATCTTACctttccCCTCCTTGCCGTAAGCGAGGGCAGGAGGTACGACGAGGCGTCTCTTCTCTCCAGCACACATCCCCTGCAGGCCTTTATCCCATCCCTTTATCACCTCTTTAATGCCCAGAGTGAACCAGACAGGCTGCTTGTCTCCCTGGGAGTAGCTGAATGAAACTTAGTTCCATTTTGAAGATATCCTTCATGGTGTACCAGCAGAATGTCTCCGTACTTCGACTTGCGATGACAGAGGAAAGGTTTGTGCAGAACTGTGATTTTTACCTCGGCCTCTGGAAGTTTCCCTCCACTGACGAACACTAGCAGCGAAGTGCAAAACCAGCTCAAACAAACCAGGAACATTTCAGAACTGATATCAGCAAAAATTATAGCTTTTGATAGGAGAAAAGATATTTGTTCAAAACTTGTAGAACTTGCCACTCACTGGAACAAGCGCGCCCGCAGTGTCAAGACGTGGCA

Function

NR:

description
peptidyl-prolyl cis-trans isomerase FKBP14

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2620455 True 642 lncRNA 0.48 3 5773850 5779668

Neighbor

gene id symbol gene type direction distance location
wipf3 NA coding upstream 24114 5724270 ~ 5749736 (+)
LOC110489437 LOC106570711 coding upstream 95946 5645183 ~ 5677904 (+)
slc6a18 LOC106570711 coding upstream 132303 5632297 ~ 5641547 (+)
LOC110489357 slc6a19 coding upstream 158477 5592112 ~ 5615373 (+)
LOC110513117 LOC106589108 coding upstream 248781 5509001 ~ 5525069 (+)
LOC110489352 LOC106570724 coding downstream 39412 5819080 ~ 5856740 (+)
LOC110520219 NA coding downstream 266922 6046590 ~ 6047475 (+)
LOC110487836 LOC106570725 coding downstream 330711 6110379 ~ 6203899 (+)
LOC118946494 NA coding downstream 614647 6394261 ~ 6398382 (+)
LOC110487847 LOC106570705 coding downstream 871796 6651464 ~ 6676974 (+)
G2291321 NA non-coding upstream 53811 5719807 ~ 5720039 (+)
G2291313 NA non-coding upstream 73233 5700013 ~ 5700617 (+)
G2291312 NA non-coding upstream 74176 5698936 ~ 5699674 (+)
G2291311 NA non-coding upstream 76072 5697520 ~ 5697778 (+)
G2291286 NA non-coding upstream 144625 5628628 ~ 5629225 (+)
G2291341 NA non-coding downstream 4497 5784165 ~ 5784756 (+)
G2291359 NA non-coding downstream 87934 5867602 ~ 5872088 (+)
G2291358 NA non-coding downstream 94158 5873826 ~ 5876241 (+)
G2291388 NA non-coding downstream 122279 5901947 ~ 5909243 (+)
G2291392 NA non-coding downstream 135899 5915567 ~ 5916929 (+)
G2291219 NA other upstream 301697 5471563 ~ 5472153 (+)
G2291194 NA other upstream 355612 5416832 ~ 5418238 (+)
dlgap3 dlgap3 other upstream 366342 5113201 ~ 5412625 (+)
smim12 smim12 other upstream 755536 5014549 ~ 5018314 (+)
G2291490 NA other downstream 368156 6147824 ~ 6148246 (+)
G2291498 NA other downstream 381410 6161078 ~ 6161719 (+)
G2291541 NA other downstream 528468 6308136 ~ 6316697 (+)
G2292347 NA other downstream 1102709 6882377 ~ 6883166 (+)
G2292666 NA other downstream 1410584 7190252 ~ 7190850 (+)

Expression


Co-expression Network