Gene
RNA
| Item | Value |
|---|---|
| gene id | G2291388 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050572.1 |
| NCBI id | CM025859.1 |
| chromosome length | 41837469 |
| location | 5901947 ~ 5909243 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2620555 | False | 627 | lncRNA | 0.41 | 2 | 5901947 | 5909243 |
| TU2620556 | True | 278 | lncRNA | 0.31 | 2 | 5901947 | 5902498 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110489352 | LOC106570724 | coding | upstream | 45207 | 5819080 ~ 5856740 (+) |
| wipf3 | NA | coding | upstream | 152211 | 5724270 ~ 5749736 (+) |
| LOC110489437 | LOC106570711 | coding | upstream | 224043 | 5645183 ~ 5677904 (+) |
| slc6a18 | LOC106570711 | coding | upstream | 260400 | 5632297 ~ 5641547 (+) |
| LOC110489357 | slc6a19 | coding | upstream | 286574 | 5592112 ~ 5615373 (+) |
| LOC110520219 | NA | coding | downstream | 137347 | 6046590 ~ 6047475 (+) |
| LOC110487836 | LOC106570725 | coding | downstream | 201136 | 6110379 ~ 6203899 (+) |
| LOC118946494 | NA | coding | downstream | 485072 | 6394261 ~ 6398382 (+) |
| LOC110487847 | LOC106570705 | coding | downstream | 742221 | 6651464 ~ 6676974 (+) |
| LOC110489360 | LOC105005722 | coding | downstream | 893790 | 6803033 ~ 6867523 (+) |
| G2291358 | NA | non-coding | upstream | 25706 | 5873826 ~ 5876241 (+) |
| G2291359 | NA | non-coding | upstream | 29859 | 5867602 ~ 5872088 (+) |
| G2291341 | NA | non-coding | upstream | 117191 | 5784165 ~ 5784756 (+) |
| G2291338 | LOC100286654 | non-coding | upstream | 122279 | 5773850 ~ 5779668 (+) |
| G2291321 | NA | non-coding | upstream | 181908 | 5719807 ~ 5720039 (+) |
| G2291392 | NA | non-coding | downstream | 6324 | 5915567 ~ 5916929 (+) |
| G2291405 | NA | non-coding | downstream | 35925 | 5945168 ~ 5946167 (+) |
| G2291406 | NA | non-coding | downstream | 36676 | 5945919 ~ 5947262 (+) |
| G2291420 | NA | non-coding | downstream | 69153 | 5978396 ~ 5980683 (+) |
| G2291428 | NA | non-coding | downstream | 77905 | 5987148 ~ 5988769 (+) |
| G2291219 | NA | other | upstream | 429794 | 5471563 ~ 5472153 (+) |
| G2291194 | NA | other | upstream | 483709 | 5416832 ~ 5418238 (+) |
| dlgap3 | dlgap3 | other | upstream | 494439 | 5113201 ~ 5412625 (+) |
| smim12 | smim12 | other | upstream | 883633 | 5014549 ~ 5018314 (+) |
| G2291490 | NA | other | downstream | 238581 | 6147824 ~ 6148246 (+) |
| G2291498 | NA | other | downstream | 251835 | 6161078 ~ 6161719 (+) |
| G2291541 | NA | other | downstream | 398893 | 6308136 ~ 6316697 (+) |
| G2292347 | NA | other | downstream | 973134 | 6882377 ~ 6883166 (+) |
| G2292666 | NA | other | downstream | 1281009 | 7190252 ~ 7190850 (+) |
