G2291392


Basic Information

Item Value
gene id G2291392
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 5915567 ~ 5916929 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2620560
gctgcatatcacgggggctgttcgatgtaTAGACTCCAACTGTTCCACTGGTGATTCTACAGGTCCCAGGTCTGTTATATCAGTGTTGCATCACTATAGACTCCAACTGTTCCACTGGTGATTCTACAGGTCCCAGGTCTGTTATATCAGTGTTGCATCACTATAGACTCCAACTGTTCCACTGGTGATTCTACAGGTCCCAGGTCTGTTATATCAGTGTTACATCACTATAGACTCCAACTGTTCCACTGGTGATTCTACAGGTCCCAGGTCTGTTATATCAGTGTTGCATCACTATAGATGGTCTAAGTATCACACCCaggccatcatcatcatcaccatggtGATGAGCAGATAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2620560 True 358 lncRNA 0.46 3 5915567 5916929

Neighbor

gene id symbol gene type direction distance location
LOC110489352 LOC106570724 coding upstream 58827 5819080 ~ 5856740 (+)
wipf3 NA coding upstream 165831 5724270 ~ 5749736 (+)
LOC110489437 LOC106570711 coding upstream 237663 5645183 ~ 5677904 (+)
slc6a18 LOC106570711 coding upstream 274020 5632297 ~ 5641547 (+)
LOC110489357 slc6a19 coding upstream 300194 5592112 ~ 5615373 (+)
LOC110520219 NA coding downstream 129661 6046590 ~ 6047475 (+)
LOC110487836 LOC106570725 coding downstream 193450 6110379 ~ 6203899 (+)
LOC118946494 NA coding downstream 477386 6394261 ~ 6398382 (+)
LOC110487847 LOC106570705 coding downstream 734535 6651464 ~ 6676974 (+)
LOC110489360 LOC105005722 coding downstream 886104 6803033 ~ 6867523 (+)
G2291388 NA non-coding upstream 6324 5901947 ~ 5909243 (+)
G2291358 NA non-coding upstream 39326 5873826 ~ 5876241 (+)
G2291359 NA non-coding upstream 43479 5867602 ~ 5872088 (+)
G2291341 NA non-coding upstream 130811 5784165 ~ 5784756 (+)
G2291338 LOC100286654 non-coding upstream 135899 5773850 ~ 5779668 (+)
G2291405 NA non-coding downstream 28239 5945168 ~ 5946167 (+)
G2291406 NA non-coding downstream 28990 5945919 ~ 5947262 (+)
G2291420 NA non-coding downstream 61467 5978396 ~ 5980683 (+)
G2291428 NA non-coding downstream 70219 5987148 ~ 5988769 (+)
G2291430 NA non-coding downstream 74468 5991397 ~ 5997376 (+)
G2291219 NA other upstream 443414 5471563 ~ 5472153 (+)
G2291194 NA other upstream 497329 5416832 ~ 5418238 (+)
dlgap3 dlgap3 other upstream 508059 5113201 ~ 5412625 (+)
smim12 smim12 other upstream 897253 5014549 ~ 5018314 (+)
G2291490 NA other downstream 230895 6147824 ~ 6148246 (+)
G2291498 NA other downstream 244149 6161078 ~ 6161719 (+)
G2291541 NA other downstream 391207 6308136 ~ 6316697 (+)
G2292347 NA other downstream 965448 6882377 ~ 6883166 (+)
G2292666 NA other downstream 1273323 7190252 ~ 7190850 (+)

Expression


Co-expression Network