Gene
RNA
| Item | Value |
|---|---|
| gene id | G2291821 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050572.1 |
| NCBI id | CM025859.1 |
| chromosome length | 41837469 |
| location | 5928382 ~ 5929452 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2621076 | False | 289 | lncRNA | 0.56 | 2 | 5928382 | 5928912 |
| TU2621077 | True | 323 | lncRNA | 0.54 | 2 | 5928382 | 5929452 |
5,925,200
5,925,600
5,926,000
5,926,400
5,926,800
5,927,200
5,927,600
5,928,000
5,928,400
5,928,800
5,929,200
5,929,600
5,930,000
5,930,400
5,930,800
5,931,200
NC_050572.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118946472 | NA | coding | downstream | 42977 | 5873825 ~ 5924785 (-) |
| LOC110487842 | LOC106570723 | coding | downstream | 117714 | 5782240 ~ 5810668 (-) |
| fkbp14 | LOC100286654 | coding | downstream | 148679 | 5772845 ~ 5779703 (-) |
| nup42 | LOC106570714 | coding | downstream | 215007 | 5700113 ~ 5713375 (-) |
| tert | tert | coding | downstream | 231035 | 5679699 ~ 5697347 (-) |
| LOC110487837 | sync | coding | upstream | 141000 | 6070452 ~ 6072927 (-) |
| LOC110487835 | LOC106570727 | coding | upstream | 296694 | 6226146 ~ 6267213 (-) |
| LOC110487845 | LOC106570728 | coding | upstream | 380126 | 6309578 ~ 6326946 (-) |
| LOC110487846 | LOC106589091 | coding | upstream | 542881 | 6472333 ~ 6550210 (-) |
| LOC110487848 | LOC106570707 | coding | upstream | 943781 | 6873233 ~ 6886296 (-) |
| G2291815 | NA | non-coding | downstream | 7755 | 5919806 ~ 5920627 (-) |
| G2291788 | NA | non-coding | downstream | 25833 | 5899650 ~ 5902549 (-) |
| G2291791 | NA | non-coding | downstream | 41373 | 5838984 ~ 5887009 (-) |
| G2291799 | NA | non-coding | downstream | 67373 | 5857049 ~ 5861009 (-) |
| G2291822 | NA | non-coding | upstream | 3246 | 5932698 ~ 5957047 (-) |
| G2291837 | NA | non-coding | upstream | 41083 | 5970535 ~ 5971700 (-) |
| G2291843 | NA | non-coding | upstream | 51649 | 5981101 ~ 5981494 (-) |
| G2291851 | NA | non-coding | upstream | 60851 | 5990303 ~ 5994661 (-) |
| G2291854 | NA | non-coding | upstream | 70940 | 6000392 ~ 6000995 (-) |
| G2291639 | NA | other | downstream | 419243 | 5508487 ~ 5509139 (-) |
| zbtb8b | LOC106570719 | other | downstream | 439084 | 5479158 ~ 5489347 (-) |
| gja4 | LOC106589111 | other | downstream | 860941 | 5040880 ~ 5067538 (-) |
| G2290915 | NA | other | downstream | 890065 | 5037465 ~ 5038317 (-) |
| G2290833 | NA | other | downstream | 966622 | 4961160 ~ 4961760 (-) |
| G2292176 | NA | other | upstream | 647623 | 6577075 ~ 6577556 (-) |
| G2292514 | NA | other | upstream | 1011824 | 6941276 ~ 6946764 (-) |
| G2293096 | NA | other | upstream | 1721028 | 7650480 ~ 7651999 (-) |
| LOC110489362 | LOC106589064 | other | upstream | 1952895 | 7882190 ~ 7894854 (-) |
| G2293313 | NA | other | upstream | 1985165 | 7914617 ~ 7915538 (-) |
