Gene
RNA
| Item | Value |
|---|---|
| gene id | G2291420 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050572.1 |
| NCBI id | CM025859.1 |
| chromosome length | 41837469 |
| location | 5978396 ~ 5980683 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2620593 | False | 434 | lncRNA | 0.37 | 2 | 5978396 | 5979605 |
| TU2620595 | False | 305 | lncRNA | 0.36 | 3 | 5978396 | 5980683 |
| TU2620596 | True | 264 | lncRNA | 0.36 | 2 | 5978396 | 5980683 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110489352 | LOC106570724 | coding | upstream | 121656 | 5819080 ~ 5856740 (+) |
| wipf3 | NA | coding | upstream | 228660 | 5724270 ~ 5749736 (+) |
| LOC110489437 | LOC106570711 | coding | upstream | 300492 | 5645183 ~ 5677904 (+) |
| slc6a18 | LOC106570711 | coding | upstream | 336849 | 5632297 ~ 5641547 (+) |
| LOC110489357 | slc6a19 | coding | upstream | 363023 | 5592112 ~ 5615373 (+) |
| LOC110520219 | NA | coding | downstream | 65907 | 6046590 ~ 6047475 (+) |
| LOC110487836 | LOC106570725 | coding | downstream | 129696 | 6110379 ~ 6203899 (+) |
| LOC118946494 | NA | coding | downstream | 413632 | 6394261 ~ 6398382 (+) |
| LOC110487847 | LOC106570705 | coding | downstream | 670781 | 6651464 ~ 6676974 (+) |
| LOC110489360 | LOC105005722 | coding | downstream | 822350 | 6803033 ~ 6867523 (+) |
| G2291406 | NA | non-coding | upstream | 31134 | 5945919 ~ 5947262 (+) |
| G2291405 | NA | non-coding | upstream | 32229 | 5945168 ~ 5946167 (+) |
| G2291392 | NA | non-coding | upstream | 61467 | 5915567 ~ 5916929 (+) |
| G2291388 | NA | non-coding | upstream | 69153 | 5901947 ~ 5909243 (+) |
| G2291358 | NA | non-coding | upstream | 102155 | 5873826 ~ 5876241 (+) |
| G2291428 | NA | non-coding | downstream | 6465 | 5987148 ~ 5988769 (+) |
| G2291430 | NA | non-coding | downstream | 10714 | 5991397 ~ 5997376 (+) |
| G2291449 | NA | non-coding | downstream | 55965 | 6036648 ~ 6040574 (+) |
| G2291452 | NA | non-coding | downstream | 63531 | 6044214 ~ 6045878 (+) |
| G2291476 | NA | non-coding | downstream | 136122 | 6116805 ~ 6244236 (+) |
| G2291219 | NA | other | upstream | 506243 | 5471563 ~ 5472153 (+) |
| G2291194 | NA | other | upstream | 560158 | 5416832 ~ 5418238 (+) |
| dlgap3 | dlgap3 | other | upstream | 570888 | 5113201 ~ 5412625 (+) |
| smim12 | smim12 | other | upstream | 960082 | 5014549 ~ 5018314 (+) |
| G2291490 | NA | other | downstream | 167141 | 6147824 ~ 6148246 (+) |
| G2291498 | NA | other | downstream | 180395 | 6161078 ~ 6161719 (+) |
| G2291541 | NA | other | downstream | 327453 | 6308136 ~ 6316697 (+) |
| G2292347 | NA | other | downstream | 901694 | 6882377 ~ 6883166 (+) |
| G2292666 | NA | other | downstream | 1209569 | 7190252 ~ 7190850 (+) |
