G2292009


Basic Information

Item Value
gene id G2292009
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 6381251 ~ 6381465 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2621306
gtgtgtgtactgtgtgtgtgtgtattctgtgtgtgtataccgtgtgtgtgcactgtttgtgcaatgtgtgtgtgtactgtgtgtgtgtcctgtgtgtgtgtgtgtgtgtgtgtgtcctgtgtgtgtgtgtgtttgtacaatgtgtactgtgtactgtgtgtatgtacgtgtgtgtgtactgcgtgtttactgtgtgtgtgtgtactgtgtgtgtg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2621306 True 215 lncRNA 0.46 1 6381251 6381465

Neighbor

gene id symbol gene type direction distance location
LOC110487836 LOC106570725 coding upstream 177352 6110379 ~ 6203899 (+)
LOC110520219 NA coding upstream 333776 6046590 ~ 6047475 (+)
LOC110489352 LOC106570724 coding upstream 524511 5819080 ~ 5856740 (+)
wipf3 NA coding upstream 631515 5724270 ~ 5749736 (+)
LOC110489437 LOC106570711 coding upstream 703347 5645183 ~ 5677904 (+)
LOC118946494 NA coding downstream 12850 6394261 ~ 6398382 (+)
LOC110487847 LOC106570705 coding downstream 269999 6651464 ~ 6676974 (+)
LOC110489360 LOC105005722 coding downstream 421568 6803033 ~ 6867523 (+)
LOC110487851 LOC106570704 coding downstream 535524 6916989 ~ 6943817 (+)
LOC118946508 NA coding downstream 553887 6935352 ~ 6936494 (+)
G2292008 NA non-coding upstream 669 6380382 ~ 6380582 (+)
G2291576 NA non-coding upstream 5739 6318038 ~ 6375512 (+)
G2291590 NA non-coding upstream 32575 6348339 ~ 6348676 (+)
G2291584 NA non-coding upstream 52919 6327556 ~ 6328332 (+)
G2291521 NA non-coding upstream 144037 6230893 ~ 6237214 (+)
G2292016 NA non-coding downstream 18942 6400407 ~ 6474299 (+)
G2292026 NA non-coding downstream 73521 6454986 ~ 6456879 (+)
G2292013 NA non-coding downstream 88927 6470392 ~ 6529498 (+)
G2292049 NA non-coding downstream 127025 6508490 ~ 6510000 (+)
G2291541 NA other upstream 64554 6308136 ~ 6316697 (+)
G2291498 NA other upstream 219532 6161078 ~ 6161719 (+)
G2291490 NA other upstream 233005 6147824 ~ 6148246 (+)
G2291219 NA other upstream 909098 5471563 ~ 5472153 (+)
G2292347 NA other downstream 500912 6882377 ~ 6883166 (+)
G2292666 NA other downstream 808787 7190252 ~ 7190850 (+)
G2293172 NA other downstream 1465214 7846541 ~ 7847462 (+)
e2f3 LOC106570699 other downstream 1533159 7897661 ~ 7920212 (+)
G2293430 NA other downstream 1694222 8075687 ~ 8078381 (+)

Expression


Co-expression Network