G2292085


Basic Information

Item Value
gene id G2292085
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 6597196 ~ 6597658 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2621452
ggactttgtgatggccactccaataccttgactttgttgtccttatgccattttgcaacaactttggaagtatgcttggggtcattgtccatttggaagacccatttgcgaccaagcttaaacttcctgactgatgtcttgagattttacttcaatatatccacataattttcctgcctcgtgatgtcatctattttgtgaagtgcaccagtccctcctgcaactaagtacccccacaacatgatgctgccacccccgtgcttcagggttgggagggtgttctttggcttgcaagcctcccctttccctacaaacataaaaatggtcattatggccaatcagttctttttttgtttcatcagagcagaggatatttttccaaaatgtacaatctttgtccccatgtacagttgcaaaacgtagtctggcttttttatgacagttttagggcagtggcttcttc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2621452 True 463 lncRNA 0.43 1 6597196 6597658

Neighbor

gene id symbol gene type direction distance location
LOC118946494 NA coding upstream 199117 6394261 ~ 6398382 (+)
LOC110487836 LOC106570725 coding upstream 393297 6110379 ~ 6203899 (+)
LOC110520219 NA coding upstream 549721 6046590 ~ 6047475 (+)
LOC110489352 LOC106570724 coding upstream 740456 5819080 ~ 5856740 (+)
wipf3 NA coding upstream 847460 5724270 ~ 5749736 (+)
LOC110487847 LOC106570705 coding downstream 53806 6651464 ~ 6676974 (+)
LOC110489360 LOC105005722 coding downstream 205375 6803033 ~ 6867523 (+)
LOC110487851 LOC106570704 coding downstream 319331 6916989 ~ 6943817 (+)
LOC118946508 NA coding downstream 337694 6935352 ~ 6936494 (+)
LOC110487852 LOC106570703 coding downstream 418572 7016230 ~ 7044759 (+)
G2292082 NA non-coding upstream 5037 6591843 ~ 6592159 (+)
G2292070 NA non-coding upstream 37439 6559344 ~ 6559757 (+)
G2292065 NA non-coding upstream 48040 6544391 ~ 6549156 (+)
G2292013 NA non-coding upstream 67698 6470392 ~ 6529498 (+)
G2292090 NA non-coding downstream 12586 6610244 ~ 6610484 (+)
G2292096 NA non-coding downstream 30687 6628345 ~ 6631386 (+)
G2292078 NA non-coding downstream 79795 6677453 ~ 6683885 (+)
G2292225 NA non-coding downstream 93366 6691024 ~ 6691246 (+)
G2292277 NA non-coding downstream 153167 6750825 ~ 6751155 (+)
G2291541 NA other upstream 280499 6308136 ~ 6316697 (+)
G2291498 NA other upstream 435477 6161078 ~ 6161719 (+)
G2291490 NA other upstream 448950 6147824 ~ 6148246 (+)
G2291219 NA other upstream 1125043 5471563 ~ 5472153 (+)
G2292347 NA other downstream 284719 6882377 ~ 6883166 (+)
G2292666 NA other downstream 592594 7190252 ~ 7190850 (+)
G2293172 NA other downstream 1249021 7846541 ~ 7847462 (+)
e2f3 LOC106570699 other downstream 1316966 7897661 ~ 7920212 (+)
G2293430 NA other downstream 1478029 8075687 ~ 8078381 (+)

Expression


Co-expression Network