G2292385


Basic Information

Item Value
gene id G2292385
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 6990633 ~ 6991047 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2621846
TGCGTATTTGAGCTGGACCTCAGCCTTTCCTGTCCCCTTCATGTTATTAACCGAACAGAGATATCTTCCCTGATCCCCTGGACCTACACTCTCCAACCTGAGGGATGCGTTTCCCCCAGAGAGCTGGGAATGGAACAGTCCAGTGCGGTTGTGATACTCTCCGCTCTGGCGCGCCAGTTGGTCTGTTCCGTAGTAGAAACTGTGGACCACCCGCAAATCTTCTACCCTCTGCCATGTCACCACGAGACCCTCTTCCAGGGGGGAACCAAGGTCAAGGCTAGGGGGGAACACACAGCCCAAAACAGCCGGTTGGTTATAGACGGCTACCACTCTGGGCTGGGGCGCCTGTACTTCGAA
>TU2621850
TGCGTATTTGAGCTGGACCTCAGCCTTTCCTGTCCCCTTCATGTTATTAACCGAACAGAGATATCTTCCCTGATCCCCTGGACCTACACTCTCCAACCTGAGGGATGCGTTTCCCCCAGAGAGCTGGGAATGGAACAGTCCAGTGCGGTTGTGATACTCTCCGCTCTGGCGCGCCAGTTGGTCTGTTCCGTAGTAGAAACTGTGGACCACCCGCAAATCTTCTACCCTCTGCCATGTCACCACGAGACCCTCTTCCAGGGGGGAACCAAGGTCAAGGCTAGGGGGGAACACACAGCCCAAAACAGCCGGTTGGTTATAGACGGCTACCACTCTGGGCTGGGGCGCCTGTACTTCGAAGGCATCTGAGGGAACAAAGGAGAGACTTGAgtttgtgtgtctgggtgtgtgtgtttgt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2621846 False 357 lncRNA 0.56 1 6990633 6990989
TU2621850 True 415 lncRNA 0.55 1 6990633 6991047

Neighbor

gene id symbol gene type direction distance location
LOC110487851 LOC106570704 coding upstream 48277 6916989 ~ 6943817 (+)
LOC118946508 NA coding upstream 54139 6935352 ~ 6936494 (+)
LOC110489360 LOC105005722 coding upstream 123110 6803033 ~ 6867523 (+)
LOC110487847 LOC106570705 coding upstream 313659 6651464 ~ 6676974 (+)
LOC118946494 NA coding upstream 592554 6394261 ~ 6398382 (+)
LOC110487852 LOC106570703 coding downstream 25183 7016230 ~ 7044759 (+)
LOC110487858 LOC106589075 coding downstream 536316 7527363 ~ 7563955 (+)
LOC110487859 LOC106570693 coding downstream 580803 7571850 ~ 7590800 (+)
LOC110489363 LOC106589070 coding downstream 810844 7801891 ~ 7846316 (+)
LOC118946479 NA coding downstream 888092 7878210 ~ 7881862 (+)
G2292380 NA non-coding upstream 20571 6969793 ~ 6970062 (+)
G2292376 NA non-coding upstream 26100 6964324 ~ 6964533 (+)
G2292375 NA non-coding upstream 26736 6963440 ~ 6963897 (+)
G2292373 NA non-coding upstream 30225 6957382 ~ 6960408 (+)
G2292372 NA non-coding upstream 37047 6953381 ~ 6953586 (+)
G2292445 NA non-coding downstream 118510 7109557 ~ 7112661 (+)
G2292603 NA non-coding downstream 125276 7116323 ~ 7116594 (+)
G2292604 NA non-coding downstream 125731 7116778 ~ 7118313 (+)
G2292639 NA non-coding downstream 168641 7159688 ~ 7160039 (+)
G2292650 NA non-coding downstream 178937 7169984 ~ 7170212 (+)
G2292347 NA other upstream 107467 6882377 ~ 6883166 (+)
G2291541 NA other upstream 673936 6308136 ~ 6316697 (+)
G2291498 NA other upstream 828914 6161078 ~ 6161719 (+)
G2291490 NA other upstream 842387 6147824 ~ 6148246 (+)
wipf3 NA other upstream 1241175 5724270 ~ 5749736 (+)
G2292666 NA other downstream 199205 7190252 ~ 7190850 (+)
G2293172 NA other downstream 855632 7846541 ~ 7847462 (+)
e2f3 LOC106570699 other downstream 923577 7897661 ~ 7920212 (+)
G2293430 NA other downstream 1084640 8075687 ~ 8078381 (+)
G2293464 NA other downstream 1114581 8105628 ~ 8106009 (+)

Expression


Co-expression Network