G2292719


Basic Information

Item Value
gene id G2292719
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 7249869 ~ 7260410 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2622223
atagtggtatagtgatgatagtgatatagtgatgatagtgatatagtgatgatagtggtatagtgatgatagtggtatagtgatgatagtggtatagtgatgatagtggtatagtgatgagaGTGATATAGTGATGCTAGTGATAGtaatgatagtggtatagtgatgatagtggtataatggtatagtgatgatagtggtatagtgaatatagtggtatagtgatgatagtggtataatgg
>TU2622226
atagtggtatagtgatgatagtgatatagtgatgatagtgatatagtgatgatagtggtatagtgatgatagtggtatagtgatgatagtggtatagtgatgatagtggtatagtgatgagaGTGATATAGTGATGCTAGTGATAGtaatgatagtggtatagtgatgatagtggtatagtgttgatagtggtatagtgatgatagtggtataatggtatagtgttGATAGTGGTATat
>TU2622224
tgatagtggtatagtgatgatagtggtataatggtatagtgttgatagttgtatattgatgatagtggtataatggtatagtgttgatagttgtatagtgatgatagtggtatagtgatgatagtggtatagtgatgatagtggtatagtgatgatagtggtatagtgatgatagtggtatagtgatgatagtggtatagtgattatagtggtataatggtatagtgatgatagtggtatagtgatgatagtggtatagtgatgagaGTGATATAGTGATGCTAGTGATAGtaatgatagtggtatagtgatgatagtggtataatggtatagtgatgatagtggtatagtggtatagtgatgataatggtatagtgatgatagtggtatagtgatgatagtggtatagtgatgataatggtatagtgatgatagtgatagtaatgatagtggtatagtgatgatagtggtataatggtatagtgatgatagtggtatagtgatgatagtggcatagtgatgatagtggtatagtgatgatagtggtat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2622223 False 242 lncRNA 0.33 2 7249869 7255720
TU2622226 False 239 lncRNA 0.33 3 7249869 7258282
TU2622224 True 549 lncRNA 0.33 3 7255334 7260410

Neighbor

gene id symbol gene type direction distance location
LOC110487852 LOC106570703 coding upstream 205110 7016230 ~ 7044759 (+)
LOC110487851 LOC106570704 coding upstream 307513 6916989 ~ 6943817 (+)
LOC118946508 NA coding upstream 313375 6935352 ~ 6936494 (+)
LOC110489360 LOC105005722 coding upstream 382346 6803033 ~ 6867523 (+)
LOC110487847 LOC106570705 coding upstream 572895 6651464 ~ 6676974 (+)
LOC110487858 LOC106589075 coding downstream 266953 7527363 ~ 7563955 (+)
LOC110487859 LOC106570693 coding downstream 311440 7571850 ~ 7590800 (+)
LOC110489363 LOC106589070 coding downstream 541481 7801891 ~ 7846316 (+)
LOC118946479 NA coding downstream 618729 7878210 ~ 7881862 (+)
e2f3 LOC106570699 coding downstream 637251 7897661 ~ 7920212 (+)
G2292683 NA non-coding upstream 34052 7214985 ~ 7215817 (+)
G2292675 NA non-coding upstream 43067 7203443 ~ 7206802 (+)
G2292671 NA non-coding upstream 50155 7199422 ~ 7199714 (+)
G2292664 NA non-coding upstream 62576 7187033 ~ 7187293 (+)
G2292662 NA non-coding upstream 67190 7182299 ~ 7182679 (+)
G2292747 NA non-coding downstream 55425 7315835 ~ 7316657 (+)
G2292765 NA non-coding downstream 84383 7344793 ~ 7345684 (+)
G2292827 NA non-coding downstream 102464 7362874 ~ 7363111 (+)
G2292850 NA non-coding downstream 126794 7387204 ~ 7387487 (+)
G2292851 NA non-coding downstream 127446 7387856 ~ 7388083 (+)
G2292666 NA other upstream 59019 7190252 ~ 7190850 (+)
G2292347 NA other upstream 366703 6882377 ~ 6883166 (+)
G2291541 NA other upstream 933172 6308136 ~ 6316697 (+)
G2291498 NA other upstream 1088150 6161078 ~ 6161719 (+)
G2291490 NA other upstream 1101623 6147824 ~ 6148246 (+)
G2293172 NA other downstream 586269 7846541 ~ 7847462 (+)
G2293430 NA other downstream 815277 8075687 ~ 8078381 (+)
G2293464 NA other downstream 845218 8105628 ~ 8106009 (+)
G2293677 NA other downstream 1089803 8350213 ~ 8350683 (+)

Expression


Co-expression Network