G2293233


Basic Information

Item Value
gene id G2293233
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 7905843 ~ 7906341 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2622861
aaccactagggtatatgccatccctacactctaaccactagggtacctgccgtccctacactctaaccactagggtacctgccgtccctacactctaaccactagggtacctgccgtccctacactctaaccactagggtacctgccgcccctacactctaaccactagggtacctgccgttcctacactctaaccactagggtacctgccgcccctacactctaaccactagggtacctgccgtccctacactctaaccactagggtacctgccgtccctacactctaaccactagggtacctgccgtccctacactctaaccactaggctacctgccgaccctacactctaaccactagagtacctgcc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2622861 True 371 lncRNA 0.56 2 7905843 7906341

Neighbor

gene id symbol gene type direction distance location
LOC118946479 NA coding upstream 26267 7878210 ~ 7881862 (+)
LOC110489363 LOC106589070 coding upstream 59527 7801891 ~ 7846316 (+)
LOC110487859 LOC106570693 coding upstream 315043 7571850 ~ 7590800 (+)
LOC110487858 LOC106589075 coding upstream 342805 7527363 ~ 7563955 (+)
LOC110487852 LOC106570703 coding upstream 861084 7016230 ~ 7044759 (+)
LOC110487863 LOC106569297 coding downstream 292323 8197381 ~ 8202360 (+)
si:ch211-152p11.4 LOC106570678 coding downstream 504063 8410404 ~ 8420764 (+)
tnfa LOC100136509 coding downstream 597283 8503624 ~ 8506000 (+)
LOC118946524 uap56 coding downstream 920569 8826910 ~ 8833518 (+)
LOC110487872 LOC106570657 coding downstream 985298 8891639 ~ 8896196 (+)
G2293216 NA non-coding upstream 21799 7883682 ~ 7884044 (+)
G2293212 NA non-coding upstream 28018 7876740 ~ 7877825 (+)
G2293206 NA non-coding upstream 39357 7865629 ~ 7866486 (+)
G2293203 NA non-coding upstream 44641 7860416 ~ 7861202 (+)
e2f3 LOC106570699 non-coding downstream 12728 7897661 ~ 7920212 (+)
G2293226 NA non-coding downstream 15095 7921436 ~ 7921804 (+)
G2293228 NA non-coding downstream 15577 7921918 ~ 7922324 (+)
G2293239 NA non-coding downstream 16511 7922852 ~ 7923225 (+)
G2293240 NA non-coding downstream 16924 7923265 ~ 7923616 (+)
G2293172 NA other upstream 58381 7846541 ~ 7847462 (+)
G2292666 NA other upstream 714993 7190252 ~ 7190850 (+)
G2292347 NA other upstream 1022677 6882377 ~ 6883166 (+)
G2291541 NA other upstream 1589146 6308136 ~ 6316697 (+)
G2291498 NA other upstream 1744124 6161078 ~ 6161719 (+)
G2293430 NA other downstream 169346 8075687 ~ 8078381 (+)
G2293464 NA other downstream 199287 8105628 ~ 8106009 (+)
G2293677 NA other downstream 443872 8350213 ~ 8350683 (+)
G2293829 NA other downstream 604531 8510872 ~ 8511770 (+)

Expression


Co-expression Network