G2293226


Basic Information

Item Value
gene id G2293226
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 7921436 ~ 7921804 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2622847
tcctagatctgtatctaggggaatctgattctagatctgtATCTAGGGGaatctgattctagatctgtATCTAGGGGAAACTGATACTAGATCTGTATCTaggggaaactgatcctagatctgtatctaggggaatctgatcctagatctgtatctaggggaatctgatcctagatctgtatcgAGGGGAAACTGCACCTTGGTGTCACCAGTCTTTTTCTCTGCAGTTTTCCTTTATAGATCGTGGACTCTTCTATTAAGTTTTAAATGTgatttatataaataaatatatacatgagTTTTACTTAATGCTTTTATTAAGATGTTTTGGATTTTTATGAGCATGAATTGCTGTTTCTACCCACCGTC

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU2622847 True 369 lncRNA 0.37 1 7921436 7921804

Neighbor

gene id symbol gene type direction distance location
e2f3 LOC106570699 coding upstream 1986 7897661 ~ 7920212 (+)
LOC118946479 NA coding upstream 41860 7878210 ~ 7881862 (+)
LOC110489363 LOC106589070 coding upstream 75120 7801891 ~ 7846316 (+)
LOC110487859 LOC106570693 coding upstream 330636 7571850 ~ 7590800 (+)
LOC110487858 LOC106589075 coding upstream 358398 7527363 ~ 7563955 (+)
LOC110487863 LOC106569297 coding downstream 276860 8197381 ~ 8202360 (+)
si:ch211-152p11.4 LOC106570678 coding downstream 488600 8410404 ~ 8420764 (+)
tnfa LOC100136509 coding downstream 581820 8503624 ~ 8506000 (+)
LOC118946524 uap56 coding downstream 905106 8826910 ~ 8833518 (+)
LOC110487872 LOC106570657 coding downstream 969835 8891639 ~ 8896196 (+)
G2293233 NA non-coding upstream 15095 7905843 ~ 7906341 (+)
G2293216 NA non-coding upstream 37392 7883682 ~ 7884044 (+)
G2293212 NA non-coding upstream 43611 7876740 ~ 7877825 (+)
G2293228 NA non-coding downstream 114 7921918 ~ 7922324 (+)
G2293239 NA non-coding downstream 1048 7922852 ~ 7923225 (+)
G2293240 NA non-coding downstream 1461 7923265 ~ 7923616 (+)
G2293242 NA non-coding downstream 3283 7925087 ~ 7925303 (+)
G2293335 NA non-coding downstream 30350 7952154 ~ 7952432 (+)
G2293172 NA other upstream 73974 7846541 ~ 7847462 (+)
G2292666 NA other upstream 730586 7190252 ~ 7190850 (+)
G2292347 NA other upstream 1038270 6882377 ~ 6883166 (+)
G2291541 NA other upstream 1604739 6308136 ~ 6316697 (+)
G2293430 NA other downstream 153883 8075687 ~ 8078381 (+)
G2293464 NA other downstream 183824 8105628 ~ 8106009 (+)
G2293677 NA other downstream 428409 8350213 ~ 8350683 (+)
G2293829 NA other downstream 589068 8510872 ~ 8511770 (+)
G2293942 NA other downstream 869297 8791101 ~ 8876464 (+)

Expression


Co-expression Network