G2293358


Basic Information

Item Value
gene id G2293358
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 7983433 ~ 7985475 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2623022
atgtgattcaacacaaggagatcaggtatgtgagtcaacacaaggagatcaggtatgttagtcaacaacaggagatcaggtatgttagtcaacaacatgagatcaggtatgtgagtcaacaacatgagatcaggtatgtgagtcaacaacatgagatcaggtatgtgattcaacacaaggagatcaggtatgttagtcgacaagaggagatcaggtatgtgagtcaacacaaggagatcaagTATGTTAGttaacacaaggagatcaggtatgtgagtcaacacaaggagatcaggtatgttagtcaacaaaaggagatcaggtatgttagtcaacaacatgagatcaggtatgttagtcaacaacatgagatgaggtatgtgagtcaacacaagg

Function

NR:

description
histone-lysine N-methyltransferase 2D-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2623022 True 396 lncRNA 0.40 2 7983433 7985475

Neighbor

gene id symbol gene type direction distance location
e2f3 LOC106570699 coding upstream 63983 7897661 ~ 7920212 (+)
LOC118946479 NA coding upstream 103857 7878210 ~ 7881862 (+)
LOC110489363 LOC106589070 coding upstream 137117 7801891 ~ 7846316 (+)
LOC110487859 LOC106570693 coding upstream 392633 7571850 ~ 7590800 (+)
LOC110487858 LOC106589075 coding upstream 420395 7527363 ~ 7563955 (+)
LOC110487863 LOC106569297 coding downstream 213189 8197381 ~ 8202360 (+)
si:ch211-152p11.4 LOC106570678 coding downstream 424929 8410404 ~ 8420764 (+)
tnfa LOC100136509 coding downstream 518149 8503624 ~ 8506000 (+)
LOC118946524 uap56 coding downstream 841435 8826910 ~ 8833518 (+)
LOC110487872 LOC106570657 coding downstream 906164 8891639 ~ 8896196 (+)
G2293357 NA non-coding upstream 12605 7970600 ~ 7970828 (+)
G2293348 NA non-coding upstream 23299 7959892 ~ 7960134 (+)
G2293344 NA non-coding upstream 23945 7957046 ~ 7959488 (+)
G2293336 NA non-coding upstream 30579 7952631 ~ 7952854 (+)
G2293335 NA non-coding upstream 31001 7952154 ~ 7952432 (+)
G2293360 NA non-coding downstream 636 7986111 ~ 7990122 (+)
G2293374 NA non-coding downstream 16207 8001682 ~ 8002182 (+)
G2293381 NA non-coding downstream 25141 8010616 ~ 8010828 (+)
G2293394 NA non-coding downstream 35599 8021074 ~ 8022051 (+)
G2293441 NA non-coding downstream 99240 8084715 ~ 8084954 (+)
G2293172 NA other upstream 135971 7846541 ~ 7847462 (+)
G2292666 NA other upstream 792583 7190252 ~ 7190850 (+)
G2292347 NA other upstream 1100267 6882377 ~ 6883166 (+)
G2291541 NA other upstream 1666736 6308136 ~ 6316697 (+)
G2293430 NA other downstream 90212 8075687 ~ 8078381 (+)
G2293464 NA other downstream 120153 8105628 ~ 8106009 (+)
G2293677 NA other downstream 364738 8350213 ~ 8350683 (+)
G2293829 NA other downstream 525397 8510872 ~ 8511770 (+)
G2293942 NA other downstream 805626 8791101 ~ 8876464 (+)

Expression


Co-expression Network