G2293430


Basic Information

Item Value
gene id G2293430
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 8075687 ~ 8078381 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2623110
gtgtgtgtgtgtgtgcgtgtgtgtgtgtatatccccTTACTTGAACCTGAACTATCTCCCCTACAGTAGGGTATTGTACTATCTTGTCTTTGACATAATGTTCACTTCGCTAATCAGCTTGCGCTAATATCATTACAGCCCGTATATATGGAAACGCTACATATGCTGtgctgtgtttgtgtctctctctctctgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtggaaggagagagagtgagaatgagagagggagaacaagagaaacagagaacgagagagggagaacgagagagaatgagagagggagatcgagagagggagaacgagagagggagaacgagaaagagaaaaagagaacgagagagggagaacgagaaagagaaaaagagaacgagagagggagaacgagagagagagaaaaagagaacgagagagggagaacgagagagggagaacgagagagggagaacgagggaGAACGGGAGAGGGAGaacgggagagggagaaggagagagggagaatgagaacgagagagggagaacgagagagggagaacgagagagggagaacgaaagaaagagaacgagagagagagcaatagagagagagaaaaaagggtaagtagagagatggaaagaatgGTTAAGAGAGATAAAGTCTGTCTCATCGTCATTggcgatcaggcctaccaccgtcttgttgtcagcaaacttaatgatggtgttggagttgtgcgcgGCCGCTCAGTCTTGGGtgagaacaggaggggactaggCACCATGAGGAACCCCTGGGGCGGACGTGTTGTTGccttccctcaccacctgggggctgcccgtccCTCCAGgatccctcaccacctggggtctgcccgtcaggaagtccaggatccctcACCCCCTGGggtctgcccgtcaggaagtccaggatccctcaaaacctgggggcggcccatcaggaagtccaggatccctcaccacctgggggcggcccgtcaggaagtccaggatccctcaccacctgggggcagcccatcaggaagtccaggatccagttgcagatggagatGTTCAGTCCCATGGTCctgagcttgatgatgagcttggattgcactatggtgttaaatgctgagctgtagtcaatgaacaacattctcacatagttgttcCTCTTAGCCAattgggagagggcagtgtggagtgcaataatgATTGCGTCTTCTTTGGATCTGTTGGGAGTGTTATGGAAATGGAGTctgtccagggtgtctgggatgatgctgttgataTGATCCATGACCAGCCtgtcaaagcatttcatggctacagatgtgagtgctacggtgcGATTGCTATTTatacaggttaccttggcgttcttgggcacagggactatggtggtctgcttgaaacatgtaggtacagtattacagtcagggaaaggttgaacatgtcagtgaagacacttgccagctggtcagcgcatgctctgagcacACTTCCTGATATTCCATCTGGCCCCACGatcttgtgaatgttaacctgtttaaaggtcttactcatagtcgtctggaacagctggtgctctcatacatggttcagtgttgcttgcctcgaagtgagcatagaaggaatttagcttgtctggtaggtttgcgactgggtttccctttgtaatccctGATAGTTTAAAATCCCTGCTACATCTGAAGAGCACCAGAGTCGACGTAGTAGGATTCaattttagtcctgtattgatgctttgcctgtttgatggctagTTTGAGGTCCTATTAGCGTCCAAATTAGTGTCGacctccttgaaagcggcagctgaCCTTTAgttcagtgcagatgttgcctgtaatccaaggtttctggttgggatatgtacgtacggccactgtggggacgatgtcgtcaatgcacttatttatgattccggtgactgatgtggtgtactcttcaatgttattggatgaatcctggaacatattccgcTCTGTGCTAGTGAACCAATCCTGTAGCTTAGCAaccgcttcatcggaccacttccttATTAAgtgctggtacttcctgtttgagtttttgcttgtattTAGAAATCAAAGGGAGGGTGAGGAATAGCATTCAATTTcaatgtgtggagtaaagatgatCAAGAGTATTGTCGCCTTCTTGTCACAGAGGTGACATGTTGGTAAAAATGAGGTAGAAtgggatttcagtttccctgcattaaaatcactgtACACTAGAGcgcagcattttcttgtttgcttacaGCTCATTTAGTGCGATCTTAAAGCATTGGTTTGTTGTGGTAGATAGACAGCTACGGAAAATATAGATGACAACTCTCTTGGAAAATAGCATGGAGAGCAGGACCTTCCTTGATATTAGAGATTGCATACCAGCTGTTGTTGACAAAGAGACACACCCATCCCCACTTAGTCTTACCTCAGACTGCCGTCTGATCTAGACATGGAGACAAGATATATATTATCCACCTCATTGTTCATCCAAAactcagtgtgtgagtgtgtgcagagCAATGGTCTTAattc
>TU2623111
gtgtgtgtgtgtgtgcgtgtgtgtgtgtatatccccTTACTTGAACCTGAACTATCTCCCCTACAGTAGGGTATTGTACTATCTTGTCTTTGACATAATGTTCACTTCGCTAATCAGCTTGCGCTAATATCATTACAGCCCGTATATATGGAAACGCTACATATGCTGtgctgtgtttgtgtctctctctctctgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtggaaggagagagagtgagaatgagagagggagaacaagagaaacagagaacgagagagggagaacgagagagaatgagagagggagatcgagagagggagaacgagagagggagaacgagaaagagaaaaagagaacgagagagggagaacgagaaagagaaaaagagaacgagagagggagaacgagagagagagaaaaagagaacgagagagggagaacgagagagggagaacgagagagggagaacgagggaGAACGGGAGAGGGAGaacgggagagggagaaggagagagggagaatgagaacgagagagggagaacgagagagggagaacgagagagggagaacgaaagaaagagaacgagagagagagcaatagagagagagaaaaaagggtaagtagagagatggaaagaatgGTTAAGAGAGATAAAGTCTGTCTCATCGTCATTggcgatcaggcctaccaccgtcttgttgtcagcaaacttaatgatggtgttggagttgtgcgcgGCCGCTCAGTCTTGGGtgagaacaggaggggactaggCACCATGAGGAACCCCTGGGGCGGACGTGTTGTTGccttccctcaccacctgggggctgcccgtccCTCCAGgatccctcaccacctgggggcggcccgtcaggaagtccaggatccctcaccacctgggggcagcccatcaggaagtccaggatccagttgcagatggagatGTTCAGTCCCATGGTCctgagcttgatgatgagcttggattgcactatggtgttaaatgctgagctgtagtcaatgaacaacattctcacatagttgttcCTCTTAGCCAattgggagagggcagtgtggagtgcaataatgATTGCGTCTTCTTTGGATCTGTTGGGAGTGTTATGGAAATGGAGTctgtccagggtgtctgggatgatgctgttgataTGATCCATGACCAGCCtgtcaaagcatttcatggctacagatgtgagtgctacggtgcGATTGCTATTTatacaggttaccttggcgttcttgggcacagggactatggtggtctgcttgaaacatgtaggtacagtattacagtcagggaaaggttgaacatgtcagtgaagacacttgccagctggtcagcgcatgctctgagcacACTTCCTGATATTCCATCTGGCCCCACGatcttgtgaatgttaacctgtttaaaggtcttactcatagtcgtctggaacagctggtgctctcatacatggttcagtgttgcttgcctcgaagtgagcatagaaggaatttagcttgtctggtaggtttgcgactgggtttccctttgtaatccctGATAGTTTAAAATCCCTGCTACATCTGAAGAGCACCAGAGTCGACGTAGTAGGATTCaattttagtcctgtattgatgctttgcctgtttgatggctagTTTGAGGTCCTATTAGCGTCCAAATTAGTGTCGacctccttgaaagcggcagctgaCCTTTAgttcagtgcagatgttgcctgtaatccaaggtttctggttgggatatgtacgtacggccactgtggggacgatgtcgtcaatgcacttatttatgattccggtgactgatgtggtgtactcttcaatgttattggatgaatcctggaacatattccgcTCTGTGCTAGTGAACCAATCCTGTAGCTTAGCAaccgcttcatcggaccacttccttATTAAgtgctggtacttcctgtttgagtttttgcttgtattTAGAAATCAAAGGGAGGGTGAGGAATAGCATTCAATTTcaatgtgtggagtaaagatgatCAAGAGTATTGTCGCCTTCTTGTCACAGAGGTGACATGTTGGTAAAAATGAGGTAGAAtgggatttcagtttccctgcattaaaatcactgtACACTAGAGcgcagcattttcttgtttgcttacaGCTCATTTAGTGCGATCTTAAAGCATTGGTTTGTTGTGGTAGATAGACAGCTACGGAAAATATAGATGACAACTCTCTTGGAAAATAGCATGGAGAGCAGGACCTTCCTTGATATTAGAGATTGCATACCAGCTGTTGTTGACAAAGAGACACACCCATCCCCACTTAGTCTTACCTCAGACTGCCGTCTGATCTAGACATGGAGACAAGATATATATTATCCACCTCATTGTTCATCCAAAactcagtgtgtgagtgtgtgcagagCAATGGTCTTAattc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2623110 False 2601 TUCP 0.48 3 8075687 8078381
TU2623111 True 2481 TUCP 0.47 3 8075687 8078381

Neighbor

gene id symbol gene type direction distance location
e2f3 LOC106570699 coding upstream 156237 7897661 ~ 7920212 (+)
LOC118946479 NA coding upstream 196111 7878210 ~ 7881862 (+)
LOC110489363 LOC106589070 coding upstream 229371 7801891 ~ 7846316 (+)
LOC110487859 LOC106570693 coding upstream 484887 7571850 ~ 7590800 (+)
LOC110487858 LOC106589075 coding upstream 512649 7527363 ~ 7563955 (+)
LOC110487863 LOC106569297 coding downstream 120283 8197381 ~ 8202360 (+)
si:ch211-152p11.4 LOC106570678 coding downstream 332023 8410404 ~ 8420764 (+)
tnfa LOC100136509 coding downstream 425243 8503624 ~ 8506000 (+)
LOC118946524 uap56 coding downstream 748529 8826910 ~ 8833518 (+)
LOC110487872 LOC106570657 coding downstream 813258 8891639 ~ 8896196 (+)
G2293394 NA non-coding upstream 53636 8021074 ~ 8022051 (+)
G2293381 NA non-coding upstream 64859 8010616 ~ 8010828 (+)
G2293374 NA non-coding upstream 73505 8001682 ~ 8002182 (+)
G2293360 NA non-coding upstream 85565 7986111 ~ 7990122 (+)
G2293358 NA non-coding upstream 90212 7983433 ~ 7985475 (+)
G2293441 NA non-coding downstream 6334 8084715 ~ 8084954 (+)
G2293443 NA non-coding downstream 9528 8087909 ~ 8090525 (+)
G2293462 NA non-coding downstream 26633 8105014 ~ 8105298 (+)
G2293486 NA non-coding downstream 66844 8145225 ~ 8145792 (+)
G2293496 NA non-coding downstream 83065 8161446 ~ 8162454 (+)
G2293172 NA other upstream 228225 7846541 ~ 7847462 (+)
G2292666 NA other upstream 884837 7190252 ~ 7190850 (+)
G2292347 NA other upstream 1192521 6882377 ~ 6883166 (+)
G2291541 NA other upstream 1758990 6308136 ~ 6316697 (+)
G2293464 NA other downstream 27247 8105628 ~ 8106009 (+)
G2293677 NA other downstream 271832 8350213 ~ 8350683 (+)
G2293829 NA other downstream 432491 8510872 ~ 8511770 (+)
G2293942 NA other downstream 712720 8791101 ~ 8876464 (+)
G2293943 LOC106570655 other downstream 765632 8844013 ~ 8847252 (+)

Expression


Co-expression Network