Gene
RNA
| Item | Value |
|---|---|
| gene id | G2293443 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050572.1 |
| NCBI id | CM025859.1 |
| chromosome length | 41837469 |
| location | 8087909 ~ 8090525 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2623128 | False | 407 | lncRNA | 0.39 | 2 | 8087909 | 8090525 |
| TU2623129 | True | 285 | lncRNA | 0.38 | 2 | 8087909 | 8088976 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| e2f3 | LOC106570699 | coding | upstream | 168459 | 7897661 ~ 7920212 (+) |
| LOC118946479 | NA | coding | upstream | 208333 | 7878210 ~ 7881862 (+) |
| LOC110489363 | LOC106589070 | coding | upstream | 241593 | 7801891 ~ 7846316 (+) |
| LOC110487859 | LOC106570693 | coding | upstream | 497109 | 7571850 ~ 7590800 (+) |
| LOC110487858 | LOC106589075 | coding | upstream | 524871 | 7527363 ~ 7563955 (+) |
| LOC110487863 | LOC106569297 | coding | downstream | 108139 | 8197381 ~ 8202360 (+) |
| si:ch211-152p11.4 | LOC106570678 | coding | downstream | 319879 | 8410404 ~ 8420764 (+) |
| tnfa | LOC100136509 | coding | downstream | 413099 | 8503624 ~ 8506000 (+) |
| LOC118946524 | uap56 | coding | downstream | 736385 | 8826910 ~ 8833518 (+) |
| LOC110487872 | LOC106570657 | coding | downstream | 801114 | 8891639 ~ 8896196 (+) |
| G2293441 | NA | non-coding | upstream | 2955 | 8084715 ~ 8084954 (+) |
| G2293394 | NA | non-coding | upstream | 65858 | 8021074 ~ 8022051 (+) |
| G2293381 | NA | non-coding | upstream | 77081 | 8010616 ~ 8010828 (+) |
| G2293374 | NA | non-coding | upstream | 85727 | 8001682 ~ 8002182 (+) |
| G2293360 | NA | non-coding | upstream | 97787 | 7986111 ~ 7990122 (+) |
| G2293462 | NA | non-coding | downstream | 14489 | 8105014 ~ 8105298 (+) |
| G2293486 | NA | non-coding | downstream | 54700 | 8145225 ~ 8145792 (+) |
| G2293496 | NA | non-coding | downstream | 70921 | 8161446 ~ 8162454 (+) |
| G2293507 | NA | non-coding | downstream | 79594 | 8170119 ~ 8170389 (+) |
| G2293510 | NA | non-coding | downstream | 80610 | 8171135 ~ 8171351 (+) |
| G2293430 | NA | other | upstream | 9528 | 8075687 ~ 8078381 (+) |
| G2293172 | NA | other | upstream | 240447 | 7846541 ~ 7847462 (+) |
| G2292666 | NA | other | upstream | 897059 | 7190252 ~ 7190850 (+) |
| G2292347 | NA | other | upstream | 1204743 | 6882377 ~ 6883166 (+) |
| G2293464 | NA | other | downstream | 15103 | 8105628 ~ 8106009 (+) |
| G2293677 | NA | other | downstream | 259688 | 8350213 ~ 8350683 (+) |
| G2293829 | NA | other | downstream | 420347 | 8510872 ~ 8511770 (+) |
| G2293942 | NA | other | downstream | 700576 | 8791101 ~ 8876464 (+) |
| G2293943 | LOC106570655 | other | downstream | 753488 | 8844013 ~ 8847252 (+) |
