G2293486


Basic Information

Item Value
gene id G2293486
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 8145225 ~ 8145792 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2623175
TCTCATTACCTCTTCTCTCAATAACTCTCATTACCTCTCTTATCTCAATACCTCTCattacctctcttctctcattgcctctcttctctcattaccTCTCTTCTTTCattacctctcttctctcattacctctcttctctcattaCATCTCTTCACTCATTactacctctcttctctcattaccTGTCTTCTCTCATTACCGCTCTTCTCTCATTACATCTCTTCTCTCattacctctcttctctcattacctctcttctctcattacctctcttctctcattaccataccttctcccattccctctcttctctcattaccTATTATCTCTCATTACCTTTcattacctacagttgaagtctgcagtttacatacacttatgtaggagtcattaaaactcaattttcaaccactccacaaatttcttgttaacaaactatagttttggcaagtcggttggacatctactgtgtgcatgacacaagtcatttttccaacaattgtttacagacagattatttcacttataattcactgtatcacaacaccagtgggtcagaagtttaaa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2623175 True 568 lncRNA 0.38 1 8145225 8145792

Neighbor

gene id symbol gene type direction distance location
e2f3 LOC106570699 coding upstream 225775 7897661 ~ 7920212 (+)
LOC118946479 NA coding upstream 265649 7878210 ~ 7881862 (+)
LOC110489363 LOC106589070 coding upstream 298909 7801891 ~ 7846316 (+)
LOC110487859 LOC106570693 coding upstream 554425 7571850 ~ 7590800 (+)
LOC110487858 LOC106589075 coding upstream 582187 7527363 ~ 7563955 (+)
LOC110487863 LOC106569297 coding downstream 52872 8197381 ~ 8202360 (+)
si:ch211-152p11.4 LOC106570678 coding downstream 264612 8410404 ~ 8420764 (+)
tnfa LOC100136509 coding downstream 357832 8503624 ~ 8506000 (+)
LOC118946524 uap56 coding downstream 681118 8826910 ~ 8833518 (+)
LOC110487872 LOC106570657 coding downstream 745847 8891639 ~ 8896196 (+)
G2293462 NA non-coding upstream 39927 8105014 ~ 8105298 (+)
G2293443 NA non-coding upstream 54700 8087909 ~ 8090525 (+)
G2293441 NA non-coding upstream 60271 8084715 ~ 8084954 (+)
G2293394 NA non-coding upstream 123174 8021074 ~ 8022051 (+)
G2293381 NA non-coding upstream 134397 8010616 ~ 8010828 (+)
G2293496 NA non-coding downstream 15654 8161446 ~ 8162454 (+)
G2293507 NA non-coding downstream 24327 8170119 ~ 8170389 (+)
G2293510 NA non-coding downstream 25343 8171135 ~ 8171351 (+)
G2293512 NA non-coding downstream 26058 8171850 ~ 8172137 (+)
G2293525 NA non-coding downstream 50108 8195900 ~ 8197307 (+)
G2293464 NA other upstream 39216 8105628 ~ 8106009 (+)
G2293430 NA other upstream 66844 8075687 ~ 8078381 (+)
G2293172 NA other upstream 297763 7846541 ~ 7847462 (+)
G2292666 NA other upstream 954375 7190252 ~ 7190850 (+)
G2293677 NA other downstream 204421 8350213 ~ 8350683 (+)
G2293829 NA other downstream 365080 8510872 ~ 8511770 (+)
G2293942 NA other downstream 645309 8791101 ~ 8876464 (+)
G2293943 LOC106570655 other downstream 698221 8844013 ~ 8847252 (+)
G2294081 NA other downstream 949000 9094792 ~ 9103186 (+)

Expression


Co-expression Network