G2293540


Basic Information

Item Value
gene id G2293540
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 8213976 ~ 8214256 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2623239
gtcccgcgccagagccgccaccgcggacagacgcccacccagaccctcccctataggtcaaggttttgcggccggagtccgcacctttggggggggggggtactgtcacgttctgacctctatttctgttgttttgtatttatttagtatggtcagggcgtgagttgggtgggcagtctatgttttcggcctagtatggttctcaatcagaggcaggtgtcattagttgtctctgattgagaatcatacttaggtagcctgggtttcactgtgtgtttgtg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2623239 True 281 lncRNA 0.53 1 8213976 8214256

Neighbor

gene id symbol gene type direction distance location
LOC110487863 LOC106569297 coding upstream 11616 8197381 ~ 8202360 (+)
e2f3 LOC106570699 coding upstream 294526 7897661 ~ 7920212 (+)
LOC118946479 NA coding upstream 334400 7878210 ~ 7881862 (+)
LOC110489363 LOC106589070 coding upstream 367660 7801891 ~ 7846316 (+)
LOC110487859 LOC106570693 coding upstream 623176 7571850 ~ 7590800 (+)
si:ch211-152p11.4 LOC106570678 coding downstream 196148 8410404 ~ 8420764 (+)
tnfa LOC100136509 coding downstream 289368 8503624 ~ 8506000 (+)
LOC118946524 uap56 coding downstream 612654 8826910 ~ 8833518 (+)
LOC110487872 LOC106570657 coding downstream 677383 8891639 ~ 8896196 (+)
LOC110489365 LOC106570660 coding downstream 693194 8907450 ~ 8934029 (+)
G2293534 NA non-coding upstream 7447 8206253 ~ 8206529 (+)
G2293528 NA non-coding upstream 10528 8202768 ~ 8203448 (+)
G2293525 NA non-coding upstream 16669 8195900 ~ 8197307 (+)
G2293512 NA non-coding upstream 41839 8171850 ~ 8172137 (+)
G2293546 NA non-coding downstream 2483 8216739 ~ 8216984 (+)
G2293580 NA non-coding downstream 71985 8286241 ~ 8286589 (+)
G2293582 NA non-coding downstream 73479 8287735 ~ 8288670 (+)
G2293657 NA non-coding downstream 118769 8333025 ~ 8333316 (+)
G2293688 NA non-coding downstream 146212 8360468 ~ 8360708 (+)
G2293464 NA other upstream 107967 8105628 ~ 8106009 (+)
G2293430 NA other upstream 135595 8075687 ~ 8078381 (+)
G2293172 NA other upstream 366514 7846541 ~ 7847462 (+)
G2292666 NA other upstream 1023126 7190252 ~ 7190850 (+)
G2293677 NA other downstream 135957 8350213 ~ 8350683 (+)
G2293829 NA other downstream 296616 8510872 ~ 8511770 (+)
G2293942 NA other downstream 576845 8791101 ~ 8876464 (+)
G2293943 LOC106570655 other downstream 629757 8844013 ~ 8847252 (+)
G2294081 NA other downstream 880536 9094792 ~ 9103186 (+)

Expression


Co-expression Network