G2293829


Basic Information

Item Value
gene id G2293829
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 8510872 ~ 8511770 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2623583
aattcaaaTACCATATGTATACTACGTATGTATGAGCAAGATAATACATTTATCATAATAATCATTTTACACAATGTCAATATTGTCCATATCCTCGTTTTGTATAAACATCACTGGTATCATTACAGTATTCCCGACTACACAGAGCTcgctatacattatatatattatacatttacatacagaatactgaCGACCATATGTACAGACGGGCATGAGGACTGGGTTGTACAATGTTCTCGTTATAACGCGTACATAAACAGCTTCATAAGTACTACGCAGAGATTCATAAGTGCTTCACAACAAGACAACTCATATCACAGTCATTTAACAAGCTGGATACTGTACCACACTAGGGTCTAGTGAATGAACACGAGGGTAGAGGTGCTGTTACTAGAATTGAGCAGGTGCCGTTACTAGAACTGTCAAGAGGTGCTGTTACTAGAACTGAGCAGAGGTGCTGTTACTAGAACTGAGCAAGTGCTGTTACTAGAACTGAGCAGGTGCCGTTACTAGAACTGAGCAGGTGCCTTTACTAGAACTGAGCAGAGGTGCTGTTACTAGAACTGAGCAGGTGCTGCGTCGTACTGGTCCAGAGAGGGAGATGCGCTGTACGCCGTATGCCTGTCTAAATTAACATTGCTTTTCCTCATCATCACAAAGCTGATAATCAAGTCCACCCTAGGgaccttggtctaaagtagtgcactactaccctggtctaaagtagtgcattactaccctatagacc
>TU2623586
aattcaaaTACCATATGTATACTACGTATGTATGAGCAAGATAATACATTTATCATAATAATCATTTTACACAATGTCAATATTGTCCATATCCTCGTTTTGTATAAACATCACTGGTATCATTACAGTATTCCCGACTACACAGAGCTcgctatacattatatatattatacatttacatacagaatactgaCGACCATATGTACAGACGGGCATGAGGACTGGGTTGTACAATGTTCTCGTTATAACGCGTACATAAACAGCTTCATAAGTACTACGCAGAGATTCATAAGTGCTTCACAACAAGACAACTCATATCACAGTCATTTAACAAGCTGGATACTGTACCACACTAGGGTCTAGTGAATGAACACGAGGGTAGAGGTGCTGTTACTAGAATTGAGCAGGTGCCGTTACTAGAACTGTCAAGAGGTGCTGTTACTAGAACTGAGCAGAGGTGCTGTTACTAGAACTGAGCAGGTGCTGTTACTAGAACTGAGCAGGTGCCGTTACTAGAACTGAGCAGGTGCCGTTACTAGAACTGTCAAGAGGTGCTGTTACTAGAACTGAGCAGAGGTGCTGTTACTAGAACTGAGCAGGTGCTGCGTCGTACTGGTCCAGAGAGGGAGATGCGCTGTACGCCGTATGCCTGTCTAAATTAACATTGCTTTTCCTCATCATCACAAAGCTGATAATCAAGTCCACCCTAGGgaccttggtctaaagtagtgcactactaccctggtctaaagtagtgcattactaccctatagacc
>TU2623588
aattcaaaTACCATATGTATACTACGTATGTATGAGCAAGATAATACATTTATCATAATAATCATTTTACACAATGTCAATATTGTCCATATCCTCGTTTTGTATAAACATCACTGGTATCATTACAGTATTCCCGACTACACAGAGCTcgctatacattatatatattatacatttacatacagaatactgaCGACCATATGTACAGACGGGCATGAGGACTGGGTTGTACAATGTTCTCGTTATAACGCGTACATAAACAGCTTCATAAGTACTACGCAGAGATTCATAAGTGCTTCACAACAAGACAACTCATATCACAGTCATTTAACAAGCTGGATACTGTACCACACTAGGGTCTAGTGAATGAACACGAGGGTAGAGGTGCTGTTACTAGAATTGAGCAGGTGCCGTTACTAGAACTGTCAAGAGGTGCTGTTACTAGAACTGAGCAGAGGTGCTGTTACTAGAACTGAGCAAGTGCTGTTACTAGAACTGAGCAGGTGCCGTTACTAGAACTGAGCAGAGGTGCTGTTACTAGAACTGAGCAGGTGCTGCGTCGTACTGGTCCAGAGAGGGAGATGCGCTGTACGCCGTATGCCTGTCTAAATTAACATTGCTTTTCCTCATCATCACAAAGCTGATAATCAAGTCCACCCTAGGgaccttggtctaaagtagtgcactactaccctggtctaaagtagtgcattactaccctatagacc
>TU2623589
aattcaaaTACCATATGTATACTACGTATGTATGAGCAAGATAATACATTTATCATAATAATCATTTTACACAATGTCAATATTGTCCATATCCTCGTTTTGTATAAACATCACTGGTATCATTACAGTATTCCCGACTACACAGAGCTcgctatacattatatatattatacatttacatacagaatactgaCGACCATATGTACAGACGGGCATGAGGACTGGGTTGTACAATGTTCTCGTTATAACGCGTACATAAACAGCTTCATAAGTACTACGCAGAGATTCATAAGTGCTTCACAACAAGACAACTCATATCACAGTCATTTAACAAGCTGGATACTGTACCACACTAGGGTCTAGTGAATGAACACGAGGGTAGAGGTGCTGTTACTAGAATTGAGCAGGTGCCGTTACTAGAACTGTCAAGAGGTGCTGTTACTAGAACTGAGCAGAGGTGCTGTTACTAGAACTGAGCAGGTGCTGTTACTAGAACTGAGCAGGTGCCGTTACTAGAACTGAGCAGGTGCCGTTACTAGAACTGAGCAGGTGCCTTTACTAGAACTGAGCAGAGGTGCTGTTACTAGAACTGAGCAGGTGCTGCGTCGTACTGGTCCAGAGAGGGAGATGCGCTGTACGCCGTATGCCTGTCTAAATTAACATTGCTTTTCCTCATCATCACAAAGCTGATAATCAAGTCCACCCTAGGgaccttggtctaaagtagtgcactactaccctggtctaaagtagtgcattactaccctatagacc
>TU2623590
aattcaaaTACCATATGTATACTACGTATGTATGAGCAAGATAATACATTTATCATAATAATCATTTTACACAATGTCAATATTGTCCATATCCTCGTTTTGTATAAACATCACTGGTATCATTACAGTATTCCCGACTACACAGAGCTcgctatacattatatatattatacatttacatacagaatactgaCGACCATATGTACAGACGGGCATGAGGACTGGGTTGTACAATGTTCTCGTTATAACGCGTACATAAACAGCTTCATAAGTACTACGCAGAGATTCATAAGTGCTTCACAACAAGACAACTCATATCACAGTCATTTAACAAGCTGGATACTGTACCACACTAGGGTCTAGTGAATGAACACGAGGGTAGAGGTGCTGTTACTAGAATTGAGCAGGTGCCGTTACTAGAACTGTCAAGAGGTGCTGTTACTAGAACTGAGCAGAGGTGCTGTTACTAGAACTGAGCAGGTGCTGTTACTAGAACTGAGCAGGTGCCGTTACTAGAACTGAGCAGGTGCCTTTACTAGAACTGAGCAGAGGTGCTGTTACTAGAACTGAGCAGGTGCTGCGTCGTACTGGTCCAGAGAGGGAGATGCGCTGTACGCCGTATGCCTGTCTAAATTAACATTGCTTTTCCTCATCATCACAAAGCTGATAATCAAGTCCACCCTAGGgaccttggtctaaagtagtgcactactaccctggtctaaagtagtgcattactaccctatagacc
>TU2623591
aattcaaaTACCATATGTATACTACGTATGTATGAGCAAGATAATACATTTATCATAATAATCATTTTACACAATGTCAATATTGTCCATATCCTCGTTTTGTATAAACATCACTGGTATCATTACAGTATTCCCGACTACACAGAGCTcgctatacattatatatattatacatttacatacagaatactgaCGACCATATGTACAGACGGGCATGAGGACTGGGTTGTACAATGTTCTCGTTATAACGCGTACATAAACAGCTTCATAAGTACTACGCAGAGATTCATAAGTGCTTCACAACAAGACAACTCATATCACAGTCATTTAACAAGCTGGATACTGTACCACACTAGGGTCTAGTGAATGAACACGAGGGTAGAGGTGCTGTTACTAGAATTGAGCAGGTGCCGTTACTAGAACTGTCAAGAGGTGCTGTTACTAGAACTGAGCAGAGGTGCTGTTACTAGAACTGAGCAGGTGCTGTTACTAGAACTGAGCAGAGGTGCTGTTACTAGAACTGAGCAGGTGCTGCGTCGTACTGGTCCAGAGAGGGAGATGCGCTGTACGCCGTATGCCTGTCTAAATTAACATTGCTTTTCCTCATCATCACAAAGCTGATAATCAAGTCCACCCTAGGgaccttggtctaaagtagtgcactactaccctggtctaaagtagtgcattactaccctatagacc
>TU2623593
aattcaaaTACCATATGTATACTACGTATGTATGAGCAAGATAATACATTTATCATAATAATCATTTTACACAATGTCAATATTGTCCATATCCTCGTTTTGTATAAACATCACTGGTATCATTACAGTATTCCCGACTACACAGAGCTcgctatacattatatatattatacatttacatacagaatactgaCGACCATATGTACAGACGGGCATGAGGACTGGGTTGTACAATGTTCTCGTTATAACGCGTACATAAACAGCTTCATAAGTACTACGCAGAGATTCATAAGTGCTTCACAACAAGACAACTCATATCACAGTCATTTAACAAGCTGGATACTGTACCACACTAGGGTCTAGTGAATGAACACGAGGGTAGAGGTGCTGTTACTAGAACTGAGCAGGTGCCGTTACTAGAACTGTCAAGAGGTGCTGTTACTAGAACTGAGCAGAGGTGCTGTTACTAGAACTGAGCAAGTGCTGTTACTAGAACTGAGCAGGTGCCGTTACTAGAACTGAGCAGGTGCCTTTACTAGAACTGAGCAGAGGTGCTGTTACTAGAACTGAGCAGGTGCTGCGTCGTACTGGTCCAGAGAGGGAGATGCGCTGTACGCCGTATGCCTGTCTAAATTAACATTGCTTTTCCTCATCATCACAAAGCTGATAATCAAGTCCACCCTAGGgaccttggtctaaagtagtgcactactaccctggtctaaagtagtgcattactaccctatagacc
>TU2623594
aattcaaaTACCATATGTATACTACGTATGTATGAGCAAGATAATACATTTATCATAATAATCATTTTACACAATGTCAATATTGTCCATATCCTCGTTTTGTATAAACATCACTGGTATCATTACAGTATTCCCGACTACACAGAGCTcgctatacattatatatattatacatttacatacagaatactgaCGACCATATGTACAGACGGGCATGAGGACTGGGTTGTACAATGTTCTCGTTATAACGCGTACATAAACAGCTTCATAAGTACTACGCAGAGATTCATAAGTGCTTCACAACAAGACAACTCATATCACAGTCATTTAACAAGCTGGATACTGTACCACACTAGGGTCTAGTGAATGAACACGAGGGTAGAGGTGCTGTTACTAGAATTGAGCAGGTGCCGTTACTAGAACTGTCAAGAGGTGCTGTTACTAGAACTGAGCAGAGGTGCTGTTACTAGAACTGAGCAGGTGCTGTTACTAGAACTGAGCAGAGGTGCTGTTACTAGAACTGAGCAAGTGCTGTTACTAGAACTGAGCAGGTGCCGTTACTAGAACTGAGCAGGTGCCTTTACTAGAACTGAGCAGAGGTGCTGTTACTAGAACTGAGCAGGTGCTGCGTCGTACTGGTCCAGAGAGGGAGATGCGCTGTACGCCGTATGCCTGTCTAAATTAACATTGCTTTTCCTCATCATCACAAAGCTGATAATCAAGTCCACCCTAGGgaccttggtctaaagtagtgcactactaccctggtctaaagtagtgcattactaccctatagacc
>TU2623595
aattcaaaTACCATATGTATACTACGTATGTATGAGCAAGATAATACATTTATCATAATAATCATTTTACACAATGTCAATATTGTCCATATCCTCGTTTTGTATAAACATCACTGGTATCATTACAGTATTCCCGACTACACAGAGCTcgctatacattatatatattatacatttacatacagaatactgaCGACCATATGTACAGACGGGCATGAGGACTGGGTTGTACAATGTTCTCGTTATAACGCGTACATAAACAGCTTCATAAGTACTACGCAGAGATTCATAAGTGCTTCACAACAAGACAACTCATATCACAGTCATTTAACAAGCTGGATACTGTACCACACTAGGGTCTAGTGAATGAACACGAGGGTAGAGGTGCTGTTACTAGAACTGAGCAGGTGCCGTTACTAGAACTGAGCAGGTGCCTTTACTAGAACTGAGCAGAGGTGCTGTTACTAGAACTGAGCAGGTGCTGCGTCGTACTGGTCCAGAGAGGGAGATGCGCTGTACGCCGTATGCCTGTCTAAATTAACATTGCTTTTCCTCATCATCACAAAGCTGATAATCAAGTCCACCCTAGGgaccttggtctaaagtagtgcactactaccctggtctaaagtagtgcattactaccctatagacccacccagtcacccacccacccagtcaCCC
>TU2623596
aattcaaaTACCATATGTATACTACGTATGTATGAGCAAGATAATACATTTATCATAATAATCATTTTACACAATGTCAATATTGTCCATATCCTCGTTTTGTATAAACATCACTGGTATCATTACAGTATTCCCGACTACACAGAGCTcgctatacattatatatattatacatttacatacagaatactgaCGACCATATGTACAGACGGGCATGAGGACTGGGTTGTACAATGTTCTCGTTATAACGCGTACATAAACAGCTTCATAAGTACTACGCAGAGATTCATAAGTGCTTCACAACAAGACAACTCATATCACAGTCATTTAACAAGCTGGATACTGTACCACACTAGGGTCTAGTGAATGAACACGAGGGTAGAGGTGCTGTTACTAGAACTGAGCAGGTGCCGTTACTAGAACTGAGCAGGTGCCTTTACTAGAACTGAGCAGAGGTGCTGTTACTAGAACTGAGCAGGTGCTGCGTCGTACTGGTCCAGAGAGGGAGATGCGCTGTACGCCGTATGCCTGTCTAAATTAACATTGCTTTTCCTCATCATCACAAAGCTGATAATCAAGTCCACCCTAGGgaccttggtctaaagtagtgcactactaccctggtctaaagtagtgcattactaccctatagacc
>TU2623597
aattcaaaTACCATATGTATACTACGTATGTATGAGCAAGATAATACATTTATCATAATAATCATTTTACACAATGTCAATATTGTCCATATCCTCGTTTTGTATAAACATCACTGGTATCATTACAGTATTCCCGACTACACAGAGCTcgctatacattatatatattatacatttacatacagaatactgaCGACCATATGTACAGACGGGCATGAGGACTGGGTTGTACAATGTTCTCGTTATAACGCGTACATAAACAGCTTCATAAGTACTACGCAGAGATTCATAAGTGCTTCACAACAAGACAACTCATATCACAGTCATTTAACAAGCTGGATACTGTACCACACTAGGGTCTAGTGAATGAACACGAGGGTAGAGGTGCTGTTACTAGAATTGAGCAGGTGCCGTTACTAGAACTGTCAAGAGGTGCTGTTACTAGAACTGAGCAGAGGTGCTGTTACTAGAACTGAGCAAGTGCTGTTACTAGAACTGAGCAGGTGCCGTTACTAGAACTGAGCAGGTGCCTTTACTAGAACTGAGCAGAGGTGCTGTTACTAGAACTGAGCAGGTGCTGCGTCGTACTGGTCCAGAGAGGGAGATGCGCTGTACGCCGTATGCCTGTCTAAATTAACATTGCTTTTCCTCATCATCACAAAGCTGATAATCAAGTCCACCCTAGGgaccttggtctaaagtagtgcactactaccctggtctaaagtagtgcattactaccctatagacc
>TU2623598
aattcaaaTACCATATGTATACTACGTATGTATGAGCAAGATAATACATTTATCATAATAATCATTTTACACAATGTCAATATTGTCCATATCCTCGTTTTGTATAAACATCACTGGTATCATTACAGTATTCCCGACTACACAGAGCTcgctatacattatatatattatacatttacatacagaatactgaCGACCATATGTACAGACGGGCATGAGGACTGGGTTGTACAATGTTCTCGTTATAACGCGTACATAAACAGCTTCATAAGTACTACGCAGAGATTCATAAGTGCTTCACAACAAGACAACTCATATCACAGTCATTTAACAAGCTGGATACTGTACCACACTAGGGTCTAGTGAATGAACACGAGGGTAGAGGTGCTGTTACTAGAATTGAGCAGGTGCCGTTACTAGAACTGTCAAGAGGTGCTGTTACTAGAACTGAGCAGAGGTGCTGTTACTAGAACTGAGCAGGTGCTGTTACTAGAACTGAGCAGGTGCCGTTACTAGAACTGAGCAGGTGCCGTTACTAGAACTGAGCAGAGGTGCTGTTACTAGAACTGAGCAGGTGCTGCGTCGTACTGGTCCAGAGAGGGAGATGCGCTGTACGCCGTATGCCTGTCTAAATTAACATTGCTTTTCCTCATCATCACAAAGCTGATAATCAAGTCCACCCTAGGgaccttggtctaaagtagtgcactactaccctggtctaaagtagtgcattactaccctatagacccacccagtcacccacccacccagtcaCCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2623583 False 751 lncRNA 0.41 2 8510872 8511741
TU2623586 False 776 lncRNA 0.42 2 8510872 8511741
TU2623588 False 728 lncRNA 0.41 3 8510872 8511741
TU2623589 False 774 lncRNA 0.42 2 8510872 8511741
TU2623590 False 751 lncRNA 0.42 2 8510872 8511741
TU2623591 False 705 lncRNA 0.41 2 8510872 8511741
TU2623593 False 751 lncRNA 0.42 3 8510872 8511741
TU2623594 False 799 TUCP 0.42 2 8510872 8511741
TU2623595 False 684 lncRNA 0.42 3 8510872 8511770
TU2623596 False 655 lncRNA 0.41 3 8510872 8511741
TU2623597 False 751 lncRNA 0.41 2 8510872 8511741
TU2623598 True 780 lncRNA 0.43 3 8510872 8511770

Neighbor

gene id symbol gene type direction distance location
tnfa LOC100136509 coding upstream 4872 8503624 ~ 8506000 (+)
si:ch211-152p11.4 LOC106570678 coding upstream 90108 8410404 ~ 8420764 (+)
LOC110487863 LOC106569297 coding upstream 308512 8197381 ~ 8202360 (+)
e2f3 LOC106570699 coding upstream 591422 7897661 ~ 7920212 (+)
LOC118946479 NA coding upstream 631296 7878210 ~ 7881862 (+)
LOC118946524 uap56 coding downstream 315140 8826910 ~ 8833518 (+)
LOC110487872 LOC106570657 coding downstream 379869 8891639 ~ 8896196 (+)
LOC110489365 LOC106570660 coding downstream 395680 8907450 ~ 8934029 (+)
LOC110487875 LOC106570662 coding downstream 422360 8934130 ~ 8942477 (+)
stx12 LOC106570663 coding downstream 431228 8942998 ~ 8954950 (+)
G2293828 NA non-coding upstream 272 8510275 ~ 8510600 (+)
G2293746 NA non-coding upstream 70825 8439663 ~ 8440047 (+)
G2293738 NA non-coding upstream 84256 8425903 ~ 8426616 (+)
G2293725 NA non-coding upstream 106507 8404158 ~ 8404365 (+)
G2293695 NA non-coding upstream 137412 8368618 ~ 8373460 (+)
G2293831 LOC106570681 non-coding downstream 136 8511906 ~ 8515666 (+)
G2293853 NA non-coding downstream 60745 8572515 ~ 8573927 (+)
G2293884 NA non-coding downstream 117786 8629556 ~ 8630685 (+)
G2293900 NA non-coding downstream 194212 8705982 ~ 8707683 (+)
G2293901 NA non-coding downstream 199855 8711625 ~ 8711973 (+)
G2293677 NA other upstream 160189 8350213 ~ 8350683 (+)
G2293464 NA other upstream 404863 8105628 ~ 8106009 (+)
G2293430 NA other upstream 432491 8075687 ~ 8078381 (+)
G2293172 NA other upstream 663410 7846541 ~ 7847462 (+)
G2293942 NA other downstream 279331 8791101 ~ 8876464 (+)
G2293943 LOC106570655 other downstream 332243 8844013 ~ 8847252 (+)
G2294081 NA other downstream 583022 9094792 ~ 9103186 (+)
G2294452 LOC106570648 other downstream 823565 9335335 ~ 9337755 (+)
G2294925 NA other downstream 1618346 10130116 ~ 10131651 (+)

Expression


Co-expression Network