G2293901


Basic Information

Item Value
gene id G2293901
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 8711625 ~ 8711973 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2623684
ACATACTCTACTCCTACAAGGTACATATTCTACTCCTACAAGGTACATATTCTACTCCTACAAGGTACATACTCTACTCCTACAAGGTACATATTCTACTCCTACAAGGTACATACTCTACTCCTACAAGGTACATACTCTACTCCTACAAGGTACATATTCTACTCCTACAGCTACATGGTACATACTCTACTCCTACAAGGTACATATTCTACTCCTACAAGGTACATATTCTACTCCTACAAGGTACATATTCTACTCCTACAAGGTACACATTCTACTCCTACAAGGTACATATTCTACTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2623684 True 305 lncRNA 0.38 2 8711625 8711973

Neighbor

gene id symbol gene type direction distance location
tnfa LOC100136509 coding upstream 205625 8503624 ~ 8506000 (+)
si:ch211-152p11.4 LOC106570678 coding upstream 290861 8410404 ~ 8420764 (+)
LOC110487863 LOC106569297 coding upstream 509265 8197381 ~ 8202360 (+)
e2f3 LOC106570699 coding upstream 792175 7897661 ~ 7920212 (+)
LOC118946479 NA coding upstream 832049 7878210 ~ 7881862 (+)
LOC118946524 uap56 coding downstream 114937 8826910 ~ 8833518 (+)
LOC110487872 LOC106570657 coding downstream 179666 8891639 ~ 8896196 (+)
LOC110489365 LOC106570660 coding downstream 195477 8907450 ~ 8934029 (+)
LOC110487875 LOC106570662 coding downstream 222157 8934130 ~ 8942477 (+)
stx12 LOC106570663 coding downstream 231025 8942998 ~ 8954950 (+)
G2293900 NA non-coding upstream 3942 8705982 ~ 8707683 (+)
G2293884 NA non-coding upstream 80940 8629556 ~ 8630685 (+)
G2293853 NA non-coding upstream 137698 8572515 ~ 8573927 (+)
G2293831 LOC106570681 non-coding upstream 195959 8511906 ~ 8515666 (+)
G2293829 NA non-coding upstream 199855 8510872 ~ 8511770 (+)
G2293942 NA non-coding downstream 79128 8791101 ~ 8876464 (+)
G2293988 NA non-coding downstream 135951 8847924 ~ 8848431 (+)
G2294000 NA non-coding downstream 194588 8906561 ~ 8906828 (+)
G2294001 NA non-coding downstream 194866 8906839 ~ 8907137 (+)
G2293677 NA other upstream 360942 8350213 ~ 8350683 (+)
G2293464 NA other upstream 605616 8105628 ~ 8106009 (+)
G2293430 NA other upstream 633244 8075687 ~ 8078381 (+)
G2293943 LOC106570655 other downstream 132040 8844013 ~ 8847252 (+)
G2294081 NA other downstream 382819 9094792 ~ 9103186 (+)
G2294452 LOC106570648 other downstream 623362 9335335 ~ 9337755 (+)
G2294925 NA other downstream 1418143 10130116 ~ 10131651 (+)

Expression


Co-expression Network