Gene
RNA
| Item | Value |
|---|---|
| gene id | G2293988 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050572.1 |
| NCBI id | CM025859.1 |
| chromosome length | 41837469 |
| location | 8847924 ~ 8848431 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2623806 | True | 433 | lncRNA | 0.51 | 2 | 8847924 | 8848431 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118946524 | uap56 | coding | upstream | 14406 | 8826910 ~ 8833518 (+) |
| tnfa | LOC100136509 | coding | upstream | 341924 | 8503624 ~ 8506000 (+) |
| si:ch211-152p11.4 | LOC106570678 | coding | upstream | 427160 | 8410404 ~ 8420764 (+) |
| LOC110487863 | LOC106569297 | coding | upstream | 645564 | 8197381 ~ 8202360 (+) |
| e2f3 | LOC106570699 | coding | upstream | 928474 | 7897661 ~ 7920212 (+) |
| LOC110487872 | LOC106570657 | coding | downstream | 43208 | 8891639 ~ 8896196 (+) |
| LOC110489365 | LOC106570660 | coding | downstream | 59019 | 8907450 ~ 8934029 (+) |
| LOC110487875 | LOC106570662 | coding | downstream | 85699 | 8934130 ~ 8942477 (+) |
| stx12 | LOC106570663 | coding | downstream | 94567 | 8942998 ~ 8954950 (+) |
| LOC110487879 | LOC106570673 | coding | downstream | 157216 | 9005647 ~ 9019469 (+) |
| G2293901 | NA | non-coding | upstream | 135951 | 8711625 ~ 8711973 (+) |
| G2293900 | NA | non-coding | upstream | 140241 | 8705982 ~ 8707683 (+) |
| G2293884 | NA | non-coding | upstream | 217239 | 8629556 ~ 8630685 (+) |
| G2293853 | NA | non-coding | upstream | 273997 | 8572515 ~ 8573927 (+) |
| G2293831 | LOC106570681 | non-coding | upstream | 332258 | 8511906 ~ 8515666 (+) |
| G2294000 | NA | non-coding | downstream | 58130 | 8906561 ~ 8906828 (+) |
| G2294001 | NA | non-coding | downstream | 58408 | 8906839 ~ 8907137 (+) |
| G2294046 | NA | non-coding | downstream | 173099 | 9021530 ~ 9021761 (+) |
| G2294051 | NA | non-coding | downstream | 179353 | 9027784 ~ 9028128 (+) |
| G2293943 | LOC106570655 | other | upstream | 672 | 8844013 ~ 8847252 (+) |
| G2293942 | NA | other | upstream | 52422 | 8791101 ~ 8876464 (+) |
| G2293829 | NA | other | upstream | 336183 | 8510872 ~ 8511770 (+) |
| G2293677 | NA | other | upstream | 497241 | 8350213 ~ 8350683 (+) |
| G2293464 | NA | other | upstream | 741915 | 8105628 ~ 8106009 (+) |
| G2294081 | NA | other | downstream | 246361 | 9094792 ~ 9103186 (+) |
| G2294452 | LOC106570648 | other | downstream | 486904 | 9335335 ~ 9337755 (+) |
| G2294925 | NA | other | downstream | 1281685 | 10130116 ~ 10131651 (+) |
| LOC118946540 | NA | other | downstream | 1470421 | 10318805 ~ 10323588 (+) |
| LOC110487904 | snrpd1 | other | downstream | 1666523 | 10509464 ~ 10521398 (+) |
