G2294000


Basic Information

Item Value
gene id G2294000
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 8906561 ~ 8906828 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2623819
agagacttgtcgatgacctggagccagtgggtttggcgacgagtatgaagtgagggccaaccaacgagggcgtacaggtcgcagtggtgggtagtatatggggctttgatgacaaaacggatggcactgtgatagactgcatccaatggAAGTCAATGGAAGTCTTTGTCCACAAAGCGGCACTCATCATGGAATCATGATGtcatcagtgatcttcagatagtagctctagaaagaggcggcaggtagcctagtggttagagtgttg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2623819 True 268 lncRNA 0.50 1 8906561 8906828

Neighbor

gene id symbol gene type direction distance location
LOC110487872 LOC106570657 coding upstream 10365 8891639 ~ 8896196 (+)
LOC118946524 uap56 coding upstream 73043 8826910 ~ 8833518 (+)
tnfa LOC100136509 coding upstream 400561 8503624 ~ 8506000 (+)
si:ch211-152p11.4 LOC106570678 coding upstream 485797 8410404 ~ 8420764 (+)
LOC110487863 LOC106569297 coding upstream 704201 8197381 ~ 8202360 (+)
LOC110489365 LOC106570660 coding downstream 622 8907450 ~ 8934029 (+)
LOC110487875 LOC106570662 coding downstream 27302 8934130 ~ 8942477 (+)
stx12 LOC106570663 coding downstream 36170 8942998 ~ 8954950 (+)
LOC110487879 LOC106570673 coding downstream 98819 9005647 ~ 9019469 (+)
LOC110489366 LOC105012323 coding downstream 139768 9046596 ~ 9162941 (+)
G2293942 NA non-coding upstream 30097 8791101 ~ 8876464 (+)
G2293988 NA non-coding upstream 58130 8847924 ~ 8848431 (+)
G2293901 NA non-coding upstream 194588 8711625 ~ 8711973 (+)
G2293900 NA non-coding upstream 198878 8705982 ~ 8707683 (+)
G2293884 NA non-coding upstream 275876 8629556 ~ 8630685 (+)
G2294001 NA non-coding downstream 11 8906839 ~ 8907137 (+)
G2294046 NA non-coding downstream 114702 9021530 ~ 9021761 (+)
G2294051 NA non-coding downstream 120956 9027784 ~ 9028128 (+)
G2294058 NA non-coding downstream 131368 9038196 ~ 9038405 (+)
G2293943 LOC106570655 other upstream 59309 8844013 ~ 8847252 (+)
G2293829 NA other upstream 394820 8510872 ~ 8511770 (+)
G2293677 NA other upstream 555878 8350213 ~ 8350683 (+)
G2293464 NA other upstream 800552 8105628 ~ 8106009 (+)
G2294081 NA other downstream 187964 9094792 ~ 9103186 (+)
G2294452 LOC106570648 other downstream 428507 9335335 ~ 9337755 (+)
G2294925 NA other downstream 1223288 10130116 ~ 10131651 (+)
LOC118946540 NA other downstream 1412024 10318805 ~ 10323588 (+)
LOC110487904 snrpd1 other downstream 1608126 10509464 ~ 10521398 (+)

Expression


Co-expression Network