G2294001


Basic Information

Item Value
gene id G2294001
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 8906839 ~ 8907137 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2623820
cgaaaggctcgAATCcccaaggtataaatctgtcgttctgtccctgaacaaggcagttaacccactgttcctaggccgtcattgtgaataagaattgtCTTAAAACTCTCTGGGATAGGCGTCCTACTAGAGggacaaattcaaataaataatcataaaaatgatggatattaaacatttaggtacatacaagtgtcttatattggttaaaaacttaaattcttgttaatctaactgcactgtccgatatacagtagctattacagctggggcccacatcaaaatatttttccaccggc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2623820 True 299 lncRNA 0.38 1 8906839 8907137

Neighbor

gene id symbol gene type direction distance location
LOC110487872 LOC106570657 coding upstream 10643 8891639 ~ 8896196 (+)
LOC118946524 uap56 coding upstream 73321 8826910 ~ 8833518 (+)
tnfa LOC100136509 coding upstream 400839 8503624 ~ 8506000 (+)
si:ch211-152p11.4 LOC106570678 coding upstream 486075 8410404 ~ 8420764 (+)
LOC110487863 LOC106569297 coding upstream 704479 8197381 ~ 8202360 (+)
LOC110489365 LOC106570660 coding downstream 313 8907450 ~ 8934029 (+)
LOC110487875 LOC106570662 coding downstream 26993 8934130 ~ 8942477 (+)
stx12 LOC106570663 coding downstream 35861 8942998 ~ 8954950 (+)
LOC110487879 LOC106570673 coding downstream 98510 9005647 ~ 9019469 (+)
LOC110489366 LOC105012323 coding downstream 139459 9046596 ~ 9162941 (+)
G2294000 NA non-coding upstream 11 8906561 ~ 8906828 (+)
G2293942 NA non-coding upstream 30375 8791101 ~ 8876464 (+)
G2293988 NA non-coding upstream 58408 8847924 ~ 8848431 (+)
G2293901 NA non-coding upstream 194866 8711625 ~ 8711973 (+)
G2293900 NA non-coding upstream 199156 8705982 ~ 8707683 (+)
G2294046 NA non-coding downstream 114393 9021530 ~ 9021761 (+)
G2294051 NA non-coding downstream 120647 9027784 ~ 9028128 (+)
G2294058 NA non-coding downstream 131059 9038196 ~ 9038405 (+)
G2293943 LOC106570655 other upstream 59587 8844013 ~ 8847252 (+)
G2293829 NA other upstream 395098 8510872 ~ 8511770 (+)
G2293677 NA other upstream 556156 8350213 ~ 8350683 (+)
G2293464 NA other upstream 800830 8105628 ~ 8106009 (+)
G2294081 NA other downstream 187655 9094792 ~ 9103186 (+)
G2294452 LOC106570648 other downstream 428198 9335335 ~ 9337755 (+)
G2294925 NA other downstream 1222979 10130116 ~ 10131651 (+)
LOC118946540 NA other downstream 1411715 10318805 ~ 10323588 (+)
LOC110487904 snrpd1 other downstream 1607817 10509464 ~ 10521398 (+)

Expression


Co-expression Network