G2294051


Basic Information

Item Value
gene id G2294051
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 9027784 ~ 9028128 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2623896
attgactctgtaccggtaccccctgtatatagcctccacattgactctgtaccggtaccccctgtatatagcctccacattgactctgtaccggtaccccctgtatatagtcaccacattgactctgtaccggtaccccctgtatatagcctccacattgactctgtaccggtaccccctgtatatagcctccacattgactctgtaccggtaccccctgtatatagcctccacattgactctgtaccgtaataccctgtatatagcctccacattgactctgtaccggtaccccctgtatatagcctccatattgactcagtaacagtaccccctgtatatagc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2623896 True 345 lncRNA 0.49 1 9027784 9028128

Neighbor

gene id symbol gene type direction distance location
LOC110487879 LOC106570673 coding upstream 8315 9005647 ~ 9019469 (+)
stx12 LOC106570663 coding upstream 72834 8942998 ~ 8954950 (+)
LOC110487875 LOC106570662 coding upstream 85307 8934130 ~ 8942477 (+)
LOC110489365 LOC106570660 coding upstream 93755 8907450 ~ 8934029 (+)
LOC110487872 LOC106570657 coding upstream 131588 8891639 ~ 8896196 (+)
LOC110489366 LOC105012323 coding downstream 18468 9046596 ~ 9162941 (+)
LOC118946539 NA coding downstream 296212 9324340 ~ 9325002 (+)
trnap-agg-161 NA coding downstream 325689 9353817 ~ 9353888 (+)
trnap-agg-163 NA coding downstream 328963 9357091 ~ 9357162 (+)
trnap-agg-165 NA coding downstream 334921 9363049 ~ 9363120 (+)
G2294046 NA non-coding upstream 6023 9021530 ~ 9021761 (+)
G2294001 NA non-coding upstream 120647 8906839 ~ 8907137 (+)
G2294000 NA non-coding upstream 120956 8906561 ~ 8906828 (+)
G2293942 NA non-coding upstream 151320 8791101 ~ 8876464 (+)
G2294058 NA non-coding downstream 10068 9038196 ~ 9038405 (+)
G2294062 NA non-coding downstream 19352 9047480 ~ 9047735 (+)
G2294080 NA non-coding downstream 62297 9090425 ~ 9091650 (+)
G2294083 NA non-coding downstream 80491 9108619 ~ 9158029 (+)
G2293943 LOC106570655 other upstream 180532 8844013 ~ 8847252 (+)
G2293829 NA other upstream 516043 8510872 ~ 8511770 (+)
G2293677 NA other upstream 677101 8350213 ~ 8350683 (+)
G2293464 NA other upstream 921775 8105628 ~ 8106009 (+)
G2294081 NA other downstream 66664 9094792 ~ 9103186 (+)
G2294452 LOC106570648 other downstream 307207 9335335 ~ 9337755 (+)
G2294925 NA other downstream 1101988 10130116 ~ 10131651 (+)
LOC118946540 NA other downstream 1290724 10318805 ~ 10323588 (+)
LOC110487904 snrpd1 other downstream 1486826 10509464 ~ 10521398 (+)

Expression


Co-expression Network