Gene
RNA
| Item | Value |
|---|---|
| gene id | G2294080 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050572.1 |
| NCBI id | CM025859.1 |
| chromosome length | 41837469 |
| location | 9090425 ~ 9091650 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2623926 | True | 454 | lncRNA | 0.40 | 2 | 9090425 | 9091650 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110487879 | LOC106570673 | coding | upstream | 70956 | 9005647 ~ 9019469 (+) |
| stx12 | LOC106570663 | coding | upstream | 135475 | 8942998 ~ 8954950 (+) |
| LOC110487875 | LOC106570662 | coding | upstream | 147948 | 8934130 ~ 8942477 (+) |
| LOC110489365 | LOC106570660 | coding | upstream | 156396 | 8907450 ~ 8934029 (+) |
| LOC110487872 | LOC106570657 | coding | upstream | 194229 | 8891639 ~ 8896196 (+) |
| LOC118946539 | NA | coding | downstream | 232690 | 9324340 ~ 9325002 (+) |
| trnap-agg-161 | NA | coding | downstream | 262167 | 9353817 ~ 9353888 (+) |
| trnap-agg-163 | NA | coding | downstream | 265441 | 9357091 ~ 9357162 (+) |
| trnap-agg-165 | NA | coding | downstream | 271399 | 9363049 ~ 9363120 (+) |
| trnap-agg-167 | NA | coding | downstream | 274673 | 9366323 ~ 9366394 (+) |
| G2294062 | NA | non-coding | upstream | 42690 | 9047480 ~ 9047735 (+) |
| G2294058 | NA | non-coding | upstream | 52020 | 9038196 ~ 9038405 (+) |
| G2294051 | NA | non-coding | upstream | 62297 | 9027784 ~ 9028128 (+) |
| G2294046 | NA | non-coding | upstream | 68664 | 9021530 ~ 9021761 (+) |
| G2294083 | NA | non-coding | downstream | 16969 | 9108619 ~ 9158029 (+) |
| G2294096 | NA | non-coding | downstream | 47645 | 9139295 ~ 9139987 (+) |
| G2294410 | NA | non-coding | downstream | 159420 | 9251070 ~ 9251285 (+) |
| G2294412 | NA | non-coding | downstream | 159897 | 9251547 ~ 9251752 (+) |
| G2294421 | NA | non-coding | downstream | 175106 | 9266756 ~ 9268052 (+) |
| G2293943 | LOC106570655 | other | upstream | 243173 | 8844013 ~ 8847252 (+) |
| G2293942 | NA | other | upstream | 294923 | 8791101 ~ 8876464 (+) |
| G2293829 | NA | other | upstream | 578684 | 8510872 ~ 8511770 (+) |
| G2293677 | NA | other | upstream | 739742 | 8350213 ~ 8350683 (+) |
| G2293464 | NA | other | upstream | 984416 | 8105628 ~ 8106009 (+) |
| G2294081 | NA | other | downstream | 3142 | 9094792 ~ 9103186 (+) |
| G2294452 | LOC106570648 | other | downstream | 243685 | 9335335 ~ 9337755 (+) |
| G2294925 | NA | other | downstream | 1038466 | 10130116 ~ 10131651 (+) |
| LOC118946540 | NA | other | downstream | 1227202 | 10318805 ~ 10323588 (+) |
| LOC110487904 | snrpd1 | other | downstream | 1423304 | 10509464 ~ 10521398 (+) |
