G2294096


Basic Information

Item Value
gene id G2294096
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 9139295 ~ 9139987 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2623943
CTTTAACAGGTTTTTGTCTAAAAGATCACTGAAAAAATACACCGTTCTAGAATAATGCACTAGTCTGGTGATTTGACAAGCAGTCTTGTCTTCATGAACACATTACTAACAAATCCCAAATATGAGCCAAGTCTCGATTGACCTCAATGCATTTGATAAGCTCATCTCTTTAAGGCAGGCttgttgactgactgactatatGAGATTCAGTGAGGAGTAGATCACACTGTGATCTAGCCAACCTGCACCAAGCCAGTTTCTATAGTGGTTCTCCCCTAACGGTGTCTGATCCAAGACGTTGCACTGCCAAACAAACAGTTTGCACTAGCTAGCATTTTACCTGCCAGAGAATGCCTTTATCCAATCTAACCCCAGCCATTCCATCTAACCCCAGCCATTCAATCTAACCCCAGCCACCCAATCTAACCCCAGCCATTCCATCTAACCCCAGCCATTCCATCTAACCCCAGCCACCCAATCTAACCCCAGCCATTCATTCTAACCCCAGCCATTCCATCTAACCCCAGCCATCCAATCTAACCCCAGCCATTCAATCTAACCCCAGCCATTCAATCTAACCCCAGCCATTCAATCTAACCCCAGCCATTCAATCTAACCCCAGCCACTCAATCTAACCCCAGCCATTCAATCTAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2623943 True 655 lncRNA 0.45 2 9139295 9139987

Neighbor

gene id symbol gene type direction distance location
LOC110487879 LOC106570673 coding upstream 119826 9005647 ~ 9019469 (+)
stx12 LOC106570663 coding upstream 184345 8942998 ~ 8954950 (+)
LOC110487875 LOC106570662 coding upstream 196818 8934130 ~ 8942477 (+)
LOC110489365 LOC106570660 coding upstream 205266 8907450 ~ 8934029 (+)
LOC110487872 LOC106570657 coding upstream 243099 8891639 ~ 8896196 (+)
LOC118946539 NA coding downstream 184353 9324340 ~ 9325002 (+)
trnap-agg-161 NA coding downstream 213830 9353817 ~ 9353888 (+)
trnap-agg-163 NA coding downstream 217104 9357091 ~ 9357162 (+)
trnap-agg-165 NA coding downstream 223062 9363049 ~ 9363120 (+)
trnap-agg-167 NA coding downstream 226336 9366323 ~ 9366394 (+)
G2294080 NA non-coding upstream 47645 9090425 ~ 9091650 (+)
G2294062 NA non-coding upstream 91560 9047480 ~ 9047735 (+)
G2294058 NA non-coding upstream 100890 9038196 ~ 9038405 (+)
G2294051 NA non-coding upstream 111167 9027784 ~ 9028128 (+)
G2294046 NA non-coding upstream 117534 9021530 ~ 9021761 (+)
G2294410 NA non-coding downstream 111083 9251070 ~ 9251285 (+)
G2294412 NA non-coding downstream 111560 9251547 ~ 9251752 (+)
G2294421 NA non-coding downstream 126769 9266756 ~ 9268052 (+)
G2294448 NA non-coding downstream 187463 9327450 ~ 9328654 (+)
G2294449 NA non-coding downstream 190272 9330259 ~ 9330708 (+)
G2294081 NA other upstream 36109 9094792 ~ 9103186 (+)
G2293943 LOC106570655 other upstream 292043 8844013 ~ 8847252 (+)
G2293942 NA other upstream 343793 8791101 ~ 8876464 (+)
G2293829 NA other upstream 627554 8510872 ~ 8511770 (+)
G2293677 NA other upstream 788612 8350213 ~ 8350683 (+)
G2294452 LOC106570648 other downstream 195348 9335335 ~ 9337755 (+)
G2294925 NA other downstream 990129 10130116 ~ 10131651 (+)
LOC118946540 NA other downstream 1178865 10318805 ~ 10323588 (+)
LOC110487904 snrpd1 other downstream 1374967 10509464 ~ 10521398 (+)
G2296150 LOC106570575 other downstream 2145506 11285493 ~ 11290303 (+)

Expression


Co-expression Network