G2294449


Basic Information

Item Value
gene id G2294449
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 9330259 ~ 9330708 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2624377
agtagggggaggagcagcgtgaggtaatacagtagggggaggagcagcgtgaggtaatacagtagggggaggtgcagcatgaggtaatacagtaggtgggggagcagcatgaggtaatacagtagggggaggagcagcgtgaggtaatacagtaggggaggagcagcgtgaggtaatacagtaggggaggagcagcgtgaggtaatacagtagggggaggagcagcgtgaggtaatacagtagggggaggagcagcgtgaggtaatacagtagggggaggagcagcgtgaggtaatacag

Function

NR:

description
putative keratin-associated protein 10-like ENSP00000375147

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2624377 True 300 lncRNA 0.56 2 9330259 9330708

Neighbor

gene id symbol gene type direction distance location
LOC118946539 NA coding upstream 5257 9324340 ~ 9325002 (+)
LOC110489366 LOC105012323 coding upstream 167763 9046596 ~ 9162941 (+)
LOC110487879 LOC106570673 coding upstream 310790 9005647 ~ 9019469 (+)
stx12 LOC106570663 coding upstream 375309 8942998 ~ 8954950 (+)
LOC110487875 LOC106570662 coding upstream 387782 8934130 ~ 8942477 (+)
trnap-agg-161 NA coding downstream 23109 9353817 ~ 9353888 (+)
trnap-agg-163 NA coding downstream 26383 9357091 ~ 9357162 (+)
trnap-agg-165 NA coding downstream 32341 9363049 ~ 9363120 (+)
trnap-agg-167 NA coding downstream 35615 9366323 ~ 9366394 (+)
trnap-agg-170 NA coding downstream 44837 9375545 ~ 9375616 (+)
G2294448 NA non-coding upstream 1605 9327450 ~ 9328654 (+)
G2294421 NA non-coding upstream 62207 9266756 ~ 9268052 (+)
G2294412 NA non-coding upstream 78507 9251547 ~ 9251752 (+)
G2294410 NA non-coding upstream 78974 9251070 ~ 9251285 (+)
G2294083 NA non-coding upstream 172230 9108619 ~ 9158029 (+)
G2294457 NA non-coding downstream 14053 9344761 ~ 9345078 (+)
G2294458 NA non-coding downstream 16110 9346818 ~ 9347314 (+)
trnap-agg-172 NA non-coding downstream 48201 9378892 ~ 9379108 (+)
G2294462 NA non-coding downstream 50146 9380854 ~ 9381293 (+)
G2294472 NA non-coding downstream 79134 9409842 ~ 9410070 (+)
G2294081 NA other upstream 227073 9094792 ~ 9103186 (+)
G2293943 LOC106570655 other upstream 483007 8844013 ~ 8847252 (+)
G2293942 NA other upstream 534757 8791101 ~ 8876464 (+)
G2293829 NA other upstream 818518 8510872 ~ 8511770 (+)
G2293677 NA other upstream 979576 8350213 ~ 8350683 (+)
G2294452 LOC106570648 other downstream 4627 9335335 ~ 9337755 (+)
G2294925 NA other downstream 799408 10130116 ~ 10131651 (+)
LOC118946540 NA other downstream 988144 10318805 ~ 10323588 (+)
LOC110487904 snrpd1 other downstream 1184246 10509464 ~ 10521398 (+)
G2296150 LOC106570575 other downstream 1954785 11285493 ~ 11290303 (+)

Expression


Co-expression Network