G2294462


Basic Information

Item Value
gene id G2294462
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 9380854 ~ 9381293 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2624393
atatattgtattctatactatctattgcatcttgcctgtgtcgctctgtcattgctcatccatgtatttatatattcttattccattcctttacttagatctgtgtgtattatgtagttgttgtggaattgtaagacattacttgttagatattgctgcacatgtcggaactagaagcacaagcatttcgctacactcgcaataacatctgctaacatctGCTATTTGAAGTAACACTCAAGAGTACGTTGTCTCGACACAAACAGCACCATATTACCAagtaacaaatcaaatcacatttatttgtcacatacacatggttagcagatgttaatgcgagtgtagcgaaatgcttgtgcttctagttacgacaatgcagtaataaccaacgagtaatctaacctaacaattccaaaactactaccttatacacacaagtg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2624393 True 440 lncRNA 0.36 1 9380854 9381293

Neighbor

gene id symbol gene type direction distance location
trnap-agg-172 NA coding upstream 1891 9378892 ~ 9379108 (+)
trnap-agg-170 NA coding upstream 5238 9375545 ~ 9375616 (+)
trnap-agg-167 NA coding upstream 14460 9366323 ~ 9366394 (+)
trnap-agg-165 NA coding upstream 17734 9363049 ~ 9363120 (+)
trnap-agg-163 NA coding upstream 23692 9357091 ~ 9357162 (+)
LOC110487882 LOC106570647 coding downstream 1434 9382727 ~ 9386344 (+)
LOC110487883 LOC106570652 coding downstream 29020 9410313 ~ 9429688 (+)
LOC110489367 LOC106570646 coding downstream 108501 9489794 ~ 9532662 (+)
cck-t cck-t coding downstream 186759 9568052 ~ 9573780 (+)
LOC110487884 LOC106570642 coding downstream 240734 9622027 ~ 9624695 (+)
G2294458 NA non-coding upstream 33540 9346818 ~ 9347314 (+)
G2294457 NA non-coding upstream 35776 9344761 ~ 9345078 (+)
G2294449 NA non-coding upstream 50146 9330259 ~ 9330708 (+)
G2294448 NA non-coding upstream 52200 9327450 ~ 9328654 (+)
G2294472 NA non-coding downstream 28549 9409842 ~ 9410070 (+)
G2294440 NA non-coding downstream 52755 9434048 ~ 9435450 (+)
G2294479 NA non-coding downstream 55153 9436446 ~ 9436764 (+)
G2294480 NA non-coding downstream 56137 9437430 ~ 9438504 (+)
G2294484 NA non-coding downstream 75615 9456908 ~ 9457147 (+)
G2294452 LOC106570648 other upstream 43099 9335335 ~ 9337755 (+)
G2294081 NA other upstream 277668 9094792 ~ 9103186 (+)
G2293943 LOC106570655 other upstream 533602 8844013 ~ 8847252 (+)
G2293942 NA other upstream 585352 8791101 ~ 8876464 (+)
G2293829 NA other upstream 869113 8510872 ~ 8511770 (+)
G2294925 NA other downstream 748823 10130116 ~ 10131651 (+)
LOC118946540 NA other downstream 937559 10318805 ~ 10323588 (+)
LOC110487904 snrpd1 other downstream 1133661 10509464 ~ 10521398 (+)
G2296150 LOC106570575 other downstream 1904200 11285493 ~ 11290303 (+)
G2296278 NA other downstream 2182254 11563547 ~ 11564590 (+)

Expression


Co-expression Network