G2294480


Basic Information

Item Value
gene id G2294480
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 9437430 ~ 9438504 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2624411
gcatgtgtccaagaacgatgtatcaatgaagagatatgtgaaaaacaccttgatgattgattctaaacaacgtttgccatgttttcagtcgatattatggagttaatttggaaaaaagtttgcgttttgaggactgaatttatggattttttttggtagccaaatgtgatgtataaaacggagctattcctaatacacaaggaatctttttggaaaaactgagcatctgctatctaactgagagtatcctcattgaaaacatcagaagttcttcaaaggtaaattattttatttgaaggcttttatgtttttgttaatgttgcgtgctggatgctaacgctaatgctaacgctaaatgctaacgcgaaatgctaactctagctagctacttttacacaaatgattgttttcctatggttgagaagcatattttgaaaatctgagatgacagtgttgtttacaaaaggctaagctggagagatggcatatttatttcatttcatttgcgattttcataaatagttaacgttgtgttatgctaatgagcttgctgatagatttacacaatcctggatacaggggttttttcatagctaaacatgacgcagaaaacggagcgatttgtcctaaacaaataatctttcaggaaaaactgaacatttgctatctgagagtctcctcattgaaaacatctgaagttcttcaaaggtaaattatttttttgaatgcttttctgtttttttgtgtaaatgttgccagctgaatgctaatgctaaatgctacgttagccatcaatactgttacacaaatgcttgttttgcaatggttgagaagcatattttgaaaatctgagatgacagtgttgttaacaaaaggctaagcttgagagctagcatatttatttcatttcatttgcgattttcatgaatagttaacgttgcgttatggtaatgagcttgagtctgtattcacgatcccggatccgggatggggagatcagaaaggttaacactGAGACAGACATGTATATCACATCAACTTAACACTGAGACAGACATGTATATCACATCAACTT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2624411 True 1075 lncRNA 0.35 1 9437430 9438504

Neighbor

gene id symbol gene type direction distance location
LOC110487883 LOC106570652 coding upstream 7742 9410313 ~ 9429688 (+)
LOC110487882 LOC106570647 coding upstream 51086 9382727 ~ 9386344 (+)
trnap-agg-172 NA coding upstream 58467 9378892 ~ 9379108 (+)
trnap-agg-170 NA coding upstream 61814 9375545 ~ 9375616 (+)
trnap-agg-167 NA coding upstream 71036 9366323 ~ 9366394 (+)
LOC110489367 LOC106570646 coding downstream 51290 9489794 ~ 9532662 (+)
cck-t cck-t coding downstream 129548 9568052 ~ 9573780 (+)
LOC110487884 LOC106570642 coding downstream 183523 9622027 ~ 9624695 (+)
LOC110487893 LOC106570636 coding downstream 610692 10049196 ~ 10064026 (+)
LOC118946535 NA coding downstream 652799 10091303 ~ 10092528 (+)
G2294479 NA non-coding upstream 666 9436446 ~ 9436764 (+)
G2294440 NA non-coding upstream 1980 9434048 ~ 9435450 (+)
G2294472 NA non-coding upstream 27360 9409842 ~ 9410070 (+)
G2294462 NA non-coding upstream 56137 9380854 ~ 9381293 (+)
G2294484 NA non-coding downstream 18404 9456908 ~ 9457147 (+)
G2294485 NA non-coding downstream 18900 9457404 ~ 9457615 (+)
G2294486 NA non-coding downstream 22978 9461482 ~ 9462102 (+)
G2294487 NA non-coding downstream 24186 9462690 ~ 9463008 (+)
G2294579 NA non-coding downstream 31046 9469550 ~ 9470017 (+)
G2294452 LOC106570648 other upstream 99675 9335335 ~ 9337755 (+)
G2294081 NA other upstream 334244 9094792 ~ 9103186 (+)
G2293943 LOC106570655 other upstream 590178 8844013 ~ 8847252 (+)
G2293942 NA other upstream 641928 8791101 ~ 8876464 (+)
G2293829 NA other upstream 925689 8510872 ~ 8511770 (+)
G2294925 NA other downstream 691612 10130116 ~ 10131651 (+)
LOC118946540 NA other downstream 880348 10318805 ~ 10323588 (+)
LOC110487904 snrpd1 other downstream 1076450 10509464 ~ 10521398 (+)
G2296150 LOC106570575 other downstream 1846989 11285493 ~ 11290303 (+)
G2296278 NA other downstream 2125043 11563547 ~ 11564590 (+)

Expression


Co-expression Network