G2294486



Basic Information


Item Value
gene id G2294486
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 9461482 ~ 9462102 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU2624417
gcataggcaagatgcagtagatggtatcgaggacagtatatacatatgagatgagtaatgtagggtatgtaaacattatattaagtggcattgtttaaagtggctagtgatacattttttacatacatttttccattattaaagtggctggagttgagtcagtatgttggtagcagccactcaatgttagtggtggctgtttaacagtctgctggccttgagatagaagctgtttttcagtctctctgtccctgctttgatgcacctgtactgacctcgccttctggatgatagcggggtgaacaggcagtggctcgggtggttgatgtccttgatgatctttatggccttcctgtgacatcgggtggtgtaggtgtcctggagggcaagtagtttgcccccggtgatgcgttgtgcagacctcactaccctctggagagccttacggttgagggcggagcagttgccgtaccaggcggtgggtgatacagcccgacaggatgctctcaattgtgaatctgtaaaagtttgtgggtgcttttggtgacaagccgaatttcttcagcctcctaaggttgaagaggcactgctgcaccttcttcaccacgctgtgtgtgcggg

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU2624417 True 621 lncRNA 0.48 1 9461482 9462102

Neighbor


gene id symbol gene type direction distance location
LOC110487883 LOC106570652 coding upstream 31794 9410313 ~ 9429688 (+)
LOC110487882 LOC106570647 coding upstream 75138 9382727 ~ 9386344 (+)
trnap-agg-172 NA coding upstream 82519 9378892 ~ 9379108 (+)
trnap-agg-170 NA coding upstream 85866 9375545 ~ 9375616 (+)
trnap-agg-167 NA coding upstream 95088 9366323 ~ 9366394 (+)
LOC110489367 LOC106570646 coding downstream 27692 9489794 ~ 9532662 (+)
cck-t cck-t coding downstream 105950 9568052 ~ 9573780 (+)
LOC110487884 LOC106570642 coding downstream 159925 9622027 ~ 9624695 (+)
LOC110487893 LOC106570636 coding downstream 587094 10049196 ~ 10064026 (+)
LOC118946535 NA coding downstream 629201 10091303 ~ 10092528 (+)
G2294485 NA non-coding upstream 3867 9457404 ~ 9457615 (+)
G2294484 NA non-coding upstream 4335 9456908 ~ 9457147 (+)
G2294480 NA non-coding upstream 22978 9437430 ~ 9438504 (+)
G2294479 NA non-coding upstream 24718 9436446 ~ 9436764 (+)
G2294440 NA non-coding upstream 26032 9434048 ~ 9435450 (+)
G2294487 NA non-coding downstream 588 9462690 ~ 9463008 (+)
G2294579 NA non-coding downstream 7448 9469550 ~ 9470017 (+)
G2294582 NA non-coding downstream 10432 9472534 ~ 9476717 (+)
G2294583 NA non-coding downstream 18880 9480982 ~ 9482042 (+)
G2294608 NA non-coding downstream 30559 9492661 ~ 9492861 (+)
G2294452 LOC106570648 other upstream 123727 9335335 ~ 9337755 (+)
G2294081 NA other upstream 358296 9094792 ~ 9103186 (+)
G2293943 LOC106570655 other upstream 614230 8844013 ~ 8847252 (+)
G2293942 NA other upstream 665980 8791101 ~ 8876464 (+)
G2293829 NA other upstream 949741 8510872 ~ 8511770 (+)
G2294925 NA other downstream 668014 10130116 ~ 10131651 (+)
LOC118946540 NA other downstream 856750 10318805 ~ 10323588 (+)
LOC110487904 snrpd1 other downstream 1052852 10509464 ~ 10521398 (+)
G2296150 LOC106570575 other downstream 1823391 11285493 ~ 11290303 (+)
G2296278 NA other downstream 2101445 11563547 ~ 11564590 (+)

Expression



Co-expression Network