G2294579


Basic Information

Item Value
gene id G2294579
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 9469550 ~ 9470017 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2624519
tctctctgtcttcctctctctctctctctgtctcgctctctgtctctctctctgtctctctctctgtttctctctctctgtgtctctctctctctctgtctctgtctctgtctctgtctctgtctctgtctctgtctctctctctctctctctctgtctctctctctctctctctgtctctcccgctctctctctctctctctccatctctctcgctctctgtctctccccctctctctgtctctctctctctgtctctccccctctctgtctctctctctctctctctctctctctctctctctctctctctctgtctctgtctctgtctctgtctctgtctctgtctctgtctctctctctctctctctctctctctctctctctctctctctctctctctctctctgtctctgtctctgtctctgtctctgtctctgtctctctgtctctctgtctctctatctc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2624519 True 468 lncRNA 0.51 1 9469550 9470017

Neighbor

gene id symbol gene type direction distance location
LOC110487883 LOC106570652 coding upstream 39862 9410313 ~ 9429688 (+)
LOC110487882 LOC106570647 coding upstream 83206 9382727 ~ 9386344 (+)
trnap-agg-172 NA coding upstream 90587 9378892 ~ 9379108 (+)
trnap-agg-170 NA coding upstream 93934 9375545 ~ 9375616 (+)
trnap-agg-167 NA coding upstream 103156 9366323 ~ 9366394 (+)
LOC110489367 LOC106570646 coding downstream 19777 9489794 ~ 9532662 (+)
cck-t cck-t coding downstream 98035 9568052 ~ 9573780 (+)
LOC110487884 LOC106570642 coding downstream 152010 9622027 ~ 9624695 (+)
LOC110487893 LOC106570636 coding downstream 579179 10049196 ~ 10064026 (+)
LOC118946535 NA coding downstream 621286 10091303 ~ 10092528 (+)
G2294487 NA non-coding upstream 6542 9462690 ~ 9463008 (+)
G2294486 NA non-coding upstream 7448 9461482 ~ 9462102 (+)
G2294485 NA non-coding upstream 11935 9457404 ~ 9457615 (+)
G2294484 NA non-coding upstream 12403 9456908 ~ 9457147 (+)
G2294480 NA non-coding upstream 31046 9437430 ~ 9438504 (+)
G2294582 NA non-coding downstream 2517 9472534 ~ 9476717 (+)
G2294583 NA non-coding downstream 10965 9480982 ~ 9482042 (+)
G2294608 NA non-coding downstream 22644 9492661 ~ 9492861 (+)
G2294613 NA non-coding downstream 27907 9497924 ~ 9498293 (+)
G2294619 NA non-coding downstream 38260 9508277 ~ 9508717 (+)
G2294452 LOC106570648 other upstream 131795 9335335 ~ 9337755 (+)
G2294081 NA other upstream 366364 9094792 ~ 9103186 (+)
G2293943 LOC106570655 other upstream 622298 8844013 ~ 8847252 (+)
G2293942 NA other upstream 674048 8791101 ~ 8876464 (+)
G2293829 NA other upstream 957809 8510872 ~ 8511770 (+)
G2294925 NA other downstream 660099 10130116 ~ 10131651 (+)
LOC118946540 NA other downstream 848835 10318805 ~ 10323588 (+)
LOC110487904 snrpd1 other downstream 1044937 10509464 ~ 10521398 (+)
G2296150 LOC106570575 other downstream 1815476 11285493 ~ 11290303 (+)
G2296278 NA other downstream 2093530 11563547 ~ 11564590 (+)

Expression


Co-expression Network