G2294582


Basic Information

Item Value
gene id G2294582
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 9472534 ~ 9476717 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2624546
ATTAACATCCACCACCTGGGTTCTGttcagggcctaaaattaacatccaccacctgggttctgttcagggccataaaattaacatccaccacctgggttctgttcagggcctaaaattaacatccaccacctgggtcctgttcagggcctaaaattaacatccaccacctgggttctgttcagggcctaaaattaacatccaccacctgggtcctgttcagggcctaaaattaacatccaccacctgggttctgttcagggcctaaaattaacatccaccacctgggttctgttcagggcctaacattaacatccaccacctgggttctgttcagggccataaaattaacatccaccacctgggttctgttcagggcctaaaattaacatccaccacctgggtcctgttcaGGGCCATAAAATTAACATCCaccacctgggtcctgttcagggcctaaaattaacatccatcacctgggttctgttcagggcctaaaattaacatCCACCACCTGGGTTCTGTTCAGGGCCTAAAATAAACATCCACCACCTGGGTTCTGTTCAGGGCCATAAAATTAACATCCATCACCTGGGTTCTGTTCTGGGCCTAAAATTAACATCCACCACCTGGGTTCTGTTCAGGGCCATAAAATTAACATCCACCACCTGGGTTCTGTTCAGGGCCATAAAATTAACATCCATCACCTGGGTTCTGTTCTGGGCCTAAAATTAACATCCACCACCTGCCAAATGCGGGTAGATTTTGGCCGACTCTACACATCGTTTCTTTCATCCTGTAAGCTTTGCTCAGCTGTCATTTTCTCTTTTGAATTCTCATTCGTTTTTTCCATCTTGATATTGTTTGCTCTTTTTCACTTCTTATTGCCTGTAATATTTGTCATTCAAAATAAAGCTGTGATAGAGAATCGCAGATAGACTGACTTTCACAAAAGCTGCAACTTTGGGACAATTAAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2624546 True 976 lncRNA 0.45 3 9472534 9476717

Neighbor

gene id symbol gene type direction distance location
LOC110487883 LOC106570652 coding upstream 42846 9410313 ~ 9429688 (+)
LOC110487882 LOC106570647 coding upstream 86190 9382727 ~ 9386344 (+)
trnap-agg-172 NA coding upstream 93571 9378892 ~ 9379108 (+)
trnap-agg-170 NA coding upstream 96918 9375545 ~ 9375616 (+)
trnap-agg-167 NA coding upstream 106140 9366323 ~ 9366394 (+)
LOC110489367 LOC106570646 coding downstream 13077 9489794 ~ 9532662 (+)
cck-t cck-t coding downstream 91335 9568052 ~ 9573780 (+)
LOC110487884 LOC106570642 coding downstream 145310 9622027 ~ 9624695 (+)
LOC110487893 LOC106570636 coding downstream 572479 10049196 ~ 10064026 (+)
LOC118946535 NA coding downstream 614586 10091303 ~ 10092528 (+)
G2294579 NA non-coding upstream 2517 9469550 ~ 9470017 (+)
G2294487 NA non-coding upstream 9526 9462690 ~ 9463008 (+)
G2294486 NA non-coding upstream 10432 9461482 ~ 9462102 (+)
G2294485 NA non-coding upstream 14919 9457404 ~ 9457615 (+)
G2294484 NA non-coding upstream 15387 9456908 ~ 9457147 (+)
G2294583 NA non-coding downstream 4265 9480982 ~ 9482042 (+)
G2294608 NA non-coding downstream 15944 9492661 ~ 9492861 (+)
G2294613 NA non-coding downstream 21207 9497924 ~ 9498293 (+)
G2294619 NA non-coding downstream 31560 9508277 ~ 9508717 (+)
G2294632 NA non-coding downstream 62909 9539626 ~ 9540594 (+)
G2294452 LOC106570648 other upstream 134779 9335335 ~ 9337755 (+)
G2294081 NA other upstream 369348 9094792 ~ 9103186 (+)
G2293943 LOC106570655 other upstream 625282 8844013 ~ 8847252 (+)
G2293942 NA other upstream 677032 8791101 ~ 8876464 (+)
G2293829 NA other upstream 960793 8510872 ~ 8511770 (+)
G2294925 NA other downstream 653399 10130116 ~ 10131651 (+)
LOC118946540 NA other downstream 842135 10318805 ~ 10323588 (+)
LOC110487904 snrpd1 other downstream 1038237 10509464 ~ 10521398 (+)
G2296150 LOC106570575 other downstream 1808776 11285493 ~ 11290303 (+)
G2296278 NA other downstream 2086830 11563547 ~ 11564590 (+)

Expression


Co-expression Network