G2294583


Basic Information

Item Value
gene id G2294583
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 9480982 ~ 9482042 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2624547
caGGACAGCAGAGTGGGTACTTGGCAGCAGTCAGCCGCCTCCTCTCAGCAGTGGTCGTCCCCAATCCCAAACTGACTGTCCACTACACAACAGGTCAACAGCTGTTCAGTCAATCAAAGCGTCGGTTTGTATGTCTCAATAAAATCACAATGAGAGCACTGTAGACATTATTTATTTCAGTCAATAAAGGTTCCAGCTAGATCGAAACATTGTTTGGTTTGTGTGTCTCAATAAAATCACAATGAGAGCAGTGTAGACATTATTTATTTCAGTCAATAAAGGTTCCAGCTAGATCGAAACATTGTTTGGTTTGTATGTCTCAATAAAATCACAATGAGAGCAGTGTAGACATTATTTATTTCAGTCAATAAAGGTCCCAGCTAGATCGAAACATTGTTTGGTTTGTGTGTCTCAATAAAATCACAATGAGAGCAGTGTAGACATTATTTATTTCAGTCAATAAAGGTCCCAGCTAGATCGAAACATTGTTTGGTTTGTGTGTCTCAATAAAATCACAATGAGAGCAGTGTAGACATTATTTATTTCAGTCAATAAAGGTTCCAGCTAGATCGAAACATTGTTTGGTTTGTGTGTCTCAATAAAATCACAATGAGAGCAGTGTAGACATTATTTATTTCAGTCAATAAAGGTTCCAGCTAGATCGAAACATTGTTTGGTTTGTGTGTCTCAATAAAATCACAATGAGAGCAGTGTAGACATTATTTATTTCAGTCAATAAAGGTCCCAGCTAGATCGAAACATTGTTTGGTTTGTGTGTCTCAATAAAATCACAATGAGAGCAGTGTAGACATTATTTATTTCAGTCAATAAAGGTCCCAGCTAGATCGAAACATTGTTTGGTTTGTGTGTCTCAATAAAATCACAATGAGAGCAGTGTAGACATTATTTATTTCAGTCAATAAAGGTTCCAGCTAGATCGAAACATTGTTTGGTTTGTGTGTctcaata
>TU2624550
caGGACAGCAGAGTGGGTACTTGGCAGCAGTCAGCCGCCTCCTCTCAGCAGTGGTCGTCCCCAATCCCAAACTGACTGTCCACTACACAACAGGTCAACAGCTGTTCAGTCAATCAAAGCGTCGGTTTGTATGTCTCAATAAAATCACAATGAGAGCACTGTAGACATTATTTATTTCAGTCAATAAAGGTTCCAGCTAGATCGAAACATTGTTTGGTTTGTGTGTCTCAATAAAATCACAATGAGAGCAGTGTAGACATTATTTATTTCAGTCAATAAAGGTTCCAGCTAGATCGAAACATTGTTTGGTTTGTGTGTCTCAATAAAATCACAATGAGAGCACTGTAGACATTATTTATTTCAGTCAATAAAGGTCCCAGCTAGATCGAAACATTGTTTGGTTTGTGTGTCTCAATAAAATCACAATGAGAGCAGTGTAGACATTATTTATTTCAGTCAATAAAGGTCCCAGCTAGATCGAAACATTGTTTGGTTTGTGTGTCTCAATAAAATCACAATGAGAGCAGTGTAGACATTATTTATTTCAGTCAATAAAGGTTCCAGCTAGATCGAAACATTGTTTGGTTTGTGTGTCTCAATAAAATCACAATGAGAGCAGTGTAGACATTATTTATTTCAGTCAATAAAGGTTCCAGCTAGATCGAAACATTGTTTGGTTTGTGTGTCTCAATAAAATCACAATGAGAGCAGTGTAGACATTATTTATTTCAGTCAATAAAGGTCCCAGCTAGATCGAAACATTGTTTGGTTTGTGTGTCTCAATAAAATCACAATGAGAGCAGTGTAGACATTATTTATTTCAGTCAATAAAGGTCCCAGCTAGATCGAAACATTGTTTGGTTTGTGTGTCTCAATAAAATCACAATGAGAGCAGTGTAGACATTATTTATTTCAGTCAATAAAGGTTCCAGCTAGATCGAAACATTGTTTGGTTTGTGTGTctcaata

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2624547 False 969 lncRNA 0.37 2 9480982 9482042
TU2624550 True 969 lncRNA 0.37 2 9480982 9482042

Neighbor

gene id symbol gene type direction distance location
LOC110487883 LOC106570652 coding upstream 51294 9410313 ~ 9429688 (+)
LOC110487882 LOC106570647 coding upstream 94638 9382727 ~ 9386344 (+)
trnap-agg-172 NA coding upstream 102019 9378892 ~ 9379108 (+)
trnap-agg-170 NA coding upstream 105366 9375545 ~ 9375616 (+)
trnap-agg-167 NA coding upstream 114588 9366323 ~ 9366394 (+)
LOC110489367 LOC106570646 coding downstream 7752 9489794 ~ 9532662 (+)
cck-t cck-t coding downstream 86010 9568052 ~ 9573780 (+)
LOC110487884 LOC106570642 coding downstream 139985 9622027 ~ 9624695 (+)
LOC110487893 LOC106570636 coding downstream 567154 10049196 ~ 10064026 (+)
LOC118946535 NA coding downstream 609261 10091303 ~ 10092528 (+)
G2294582 NA non-coding upstream 4265 9472534 ~ 9476717 (+)
G2294579 NA non-coding upstream 10965 9469550 ~ 9470017 (+)
G2294487 NA non-coding upstream 17974 9462690 ~ 9463008 (+)
G2294486 NA non-coding upstream 18880 9461482 ~ 9462102 (+)
G2294485 NA non-coding upstream 23367 9457404 ~ 9457615 (+)
G2294608 NA non-coding downstream 10619 9492661 ~ 9492861 (+)
G2294613 NA non-coding downstream 15882 9497924 ~ 9498293 (+)
G2294619 NA non-coding downstream 26235 9508277 ~ 9508717 (+)
G2294632 NA non-coding downstream 57584 9539626 ~ 9540594 (+)
G2294636 NA non-coding downstream 67323 9549365 ~ 9555141 (+)
G2294452 LOC106570648 other upstream 143227 9335335 ~ 9337755 (+)
G2294081 NA other upstream 377796 9094792 ~ 9103186 (+)
G2293943 LOC106570655 other upstream 633730 8844013 ~ 8847252 (+)
G2293942 NA other upstream 685480 8791101 ~ 8876464 (+)
G2293829 NA other upstream 969241 8510872 ~ 8511770 (+)
G2294925 NA other downstream 648074 10130116 ~ 10131651 (+)
LOC118946540 NA other downstream 836810 10318805 ~ 10323588 (+)
LOC110487904 snrpd1 other downstream 1032912 10509464 ~ 10521398 (+)
G2296150 LOC106570575 other downstream 1803451 11285493 ~ 11290303 (+)
G2296278 NA other downstream 2081505 11563547 ~ 11564590 (+)

Expression


Co-expression Network