Gene
RNA
| Item | Value |
|---|---|
| gene id | G2294649 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050572.1 |
| NCBI id | CM025859.1 |
| chromosome length | 41837469 |
| location | 9584300 ~ 9585186 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2624629 | False | 559 | lncRNA | 0.34 | 2 | 9584300 | 9585186 |
| TU2624631 | True | 559 | lncRNA | 0.34 | 3 | 9584300 | 9585186 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| cck-t | cck-t | coding | upstream | 10520 | 9568052 ~ 9573780 (+) |
| LOC110489367 | LOC106570646 | coding | upstream | 51638 | 9489794 ~ 9532662 (+) |
| LOC110487883 | LOC106570652 | coding | upstream | 154612 | 9410313 ~ 9429688 (+) |
| LOC110487882 | LOC106570647 | coding | upstream | 197956 | 9382727 ~ 9386344 (+) |
| trnap-agg-172 | NA | coding | upstream | 205337 | 9378892 ~ 9379108 (+) |
| LOC110487884 | LOC106570642 | coding | downstream | 36841 | 9622027 ~ 9624695 (+) |
| LOC110487893 | LOC106570636 | coding | downstream | 464010 | 10049196 ~ 10064026 (+) |
| LOC118946535 | NA | coding | downstream | 506117 | 10091303 ~ 10092528 (+) |
| LOC118946540 | NA | coding | downstream | 736847 | 10318805 ~ 10323588 (+) |
| LOC110513484 | LOC106570612 | coding | downstream | 819186 | 10404372 ~ 10427604 (+) |
| G2294636 | NA | non-coding | upstream | 29159 | 9549365 ~ 9555141 (+) |
| G2294632 | NA | non-coding | upstream | 43706 | 9539626 ~ 9540594 (+) |
| G2294619 | NA | non-coding | upstream | 75583 | 9508277 ~ 9508717 (+) |
| G2294613 | NA | non-coding | upstream | 86007 | 9497924 ~ 9498293 (+) |
| G2294608 | NA | non-coding | upstream | 91439 | 9492661 ~ 9492861 (+) |
| G2294661 | NA | non-coding | downstream | 32825 | 9618011 ~ 9618226 (+) |
| G2294664 | NA | non-coding | downstream | 40083 | 9625269 ~ 9625484 (+) |
| G2294599 | NA | non-coding | downstream | 43017 | 9628203 ~ 9630099 (+) |
| G2294605 | NA | non-coding | downstream | 45031 | 9630217 ~ 9633050 (+) |
| G2294665 | NA | non-coding | downstream | 49957 | 9635143 ~ 9635531 (+) |
| G2294452 | LOC106570648 | other | upstream | 246545 | 9335335 ~ 9337755 (+) |
| G2294081 | NA | other | upstream | 481114 | 9094792 ~ 9103186 (+) |
| G2293943 | LOC106570655 | other | upstream | 737048 | 8844013 ~ 8847252 (+) |
| G2293942 | NA | other | upstream | 788798 | 8791101 ~ 8876464 (+) |
| G2293829 | NA | other | upstream | 1072559 | 8510872 ~ 8511770 (+) |
| G2294925 | NA | other | downstream | 544930 | 10130116 ~ 10131651 (+) |
| LOC110487904 | snrpd1 | other | downstream | 929768 | 10509464 ~ 10521398 (+) |
| G2296150 | LOC106570575 | other | downstream | 1700307 | 11285493 ~ 11290303 (+) |
| G2296278 | NA | other | downstream | 1978361 | 11563547 ~ 11564590 (+) |
