G2294661


Basic Information

Item Value
gene id G2294661
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 9618011 ~ 9618226 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2624647
TCTTTGTATAGATTTTTCAAACTGTATAATGAACATACTGATTGACACACACAGCACATTGCAATGAATAATGCTTTATGTCACCTTCACCTCATAAAACCCTctctactacatacacacaccctacacaacCCAGCCTGCTTTCCTCCTCCCTACACAACCCAgcctgctctcctcctccctacacaACCCAGCCTGCTCTCCTCCCCCCTACAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2624647 True 216 lncRNA 0.46 1 9618011 9618226

Neighbor

gene id symbol gene type direction distance location
cck-t cck-t coding upstream 44231 9568052 ~ 9573780 (+)
LOC110489367 LOC106570646 coding upstream 85349 9489794 ~ 9532662 (+)
LOC110487883 LOC106570652 coding upstream 188323 9410313 ~ 9429688 (+)
LOC110487882 LOC106570647 coding upstream 231667 9382727 ~ 9386344 (+)
trnap-agg-172 NA coding upstream 239048 9378892 ~ 9379108 (+)
LOC110487884 LOC106570642 coding downstream 3801 9622027 ~ 9624695 (+)
LOC110487893 LOC106570636 coding downstream 430970 10049196 ~ 10064026 (+)
LOC118946535 NA coding downstream 473077 10091303 ~ 10092528 (+)
LOC118946540 NA coding downstream 703807 10318805 ~ 10323588 (+)
LOC110513484 LOC106570612 coding downstream 786146 10404372 ~ 10427604 (+)
G2294649 NA non-coding upstream 32825 9584300 ~ 9585186 (+)
G2294636 NA non-coding upstream 62870 9549365 ~ 9555141 (+)
G2294632 NA non-coding upstream 77417 9539626 ~ 9540594 (+)
G2294619 NA non-coding upstream 109294 9508277 ~ 9508717 (+)
G2294613 NA non-coding upstream 119718 9497924 ~ 9498293 (+)
G2294664 NA non-coding downstream 7043 9625269 ~ 9625484 (+)
G2294599 NA non-coding downstream 9977 9628203 ~ 9630099 (+)
G2294605 NA non-coding downstream 11991 9630217 ~ 9633050 (+)
G2294665 NA non-coding downstream 16917 9635143 ~ 9635531 (+)
G2294690 NA non-coding downstream 92771 9710997 ~ 9711541 (+)
G2294452 LOC106570648 other upstream 280256 9335335 ~ 9337755 (+)
G2294081 NA other upstream 514825 9094792 ~ 9103186 (+)
G2293943 LOC106570655 other upstream 770759 8844013 ~ 8847252 (+)
G2293942 NA other upstream 822509 8791101 ~ 8876464 (+)
G2293829 NA other upstream 1106270 8510872 ~ 8511770 (+)
G2294925 NA other downstream 511890 10130116 ~ 10131651 (+)
LOC110487904 snrpd1 other downstream 896728 10509464 ~ 10521398 (+)
G2296150 LOC106570575 other downstream 1667267 11285493 ~ 11290303 (+)
G2296278 NA other downstream 1945321 11563547 ~ 11564590 (+)

Expression


Co-expression Network