G2294599


Basic Information

Item Value
gene id G2294599
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 9628203 ~ 9630099 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2624569
ccccacctgttaATGAGTCCCTCCGTCACCTAGGTAACCATTTCCATGCCAACAATAGAGCGAAAgacaggggaaaaaaacaaaaactgcaataagaaaaaaaacttttggtGTGTCTTCTTTAGCACATCTATAACTATCATAAAGTAAAATATGATTCTTAACACAGTTCCTCAGTTATACCATTATGGGACTGTTCGTCTGTATGTAAGGATCAATATCTATACGGTATACTATGTTATCTGTGAGTATAATTctcattaccacacacacacacacacacacacacactttggccATGTGCCCTTTAGAAATAATTTGTTTTTTGATATTTGGACCGTTCTCCATACTGAAGTCATCGGCTATCAGTTAAGTTCAACAAAAAACATACAGGGAATGTGACTGGCACACGGGGGGAATGTGACTGGCACACGGGGGGAATGTGACTGGCACGCGGGGGGAATGTGACTGGCACAGGGGGGAATGTGACTGGCTTAGACAGGAGTGTGGAAGAGGACACACTTGTCTTTGGCACTCTACTCCTCAGATCATTGGTTATAAAGAAGTAATGGCAAAAGGACATGATGCATTCTCTCTGAGGAGGACTGAGGAAGACCACGATGGTGGTGGTGGCGAAGGAGGCCTCACTCGGACCAATCGTCATCGTCCAACTCTGAGGAGTCGTCTTCGCTGTCGCTGCATTCCACAGCAATACGGCGAGACAAGATGGCCGCTACGTCGTTGCCATAGTTATCCttcttctcctgctctttctGTTCCTCCACTTTACGAAGATTAAAACCTGcaagagagagcggggggggttttagggtgtgtttatgtgtactggtatctctatctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtcgtacctTGCCGGATAGCTGACAGCAAGTCATTGTGAGCGTCAGCGGGGGCTTCTGGCTGAACCTGGGTGGGTTTGAGAGGAGGGGGAGCCCcaatggagaaggagggaggggggaggccagaagaggggggaggagggcctgggggaggtgggggaggaggaggaggaggggcgccACCaccctgggggagagaggggggaggaggtggagagatggtggtctgggagagaggagaaggtggggCAGGGGGGGAGGGAtaggcagaggagaagagaggagggggagcaggaggGGAGGAGTCAAATccagagggggggagggggagggatccCCAagccagaggggggagggggaggtggggcagggggaggggccaGGTTGGGCCGGGAGCCACTGGAAGCAGAAGAGGTCATGGGAGGGGCTGGAGGAGGGTGTGTGGGGCTCAGAACGCTGGTGCGCTTCTGGGATGGTCCTCCGTACTGTCC
>TU2624570
ccccacctgttaATGAGTCCCTCCGTCACCTAGGTAACCATTTCCATGCCAACAATAGAGCGAAAgacaggggaaaaaaacaaaaactgcaataagaaaaaaaacttttggtGTGTCTTCTTTAGCACATCTATAACTATCATAAAGTAAAATATGATTCTTAACACAGTTCCTCAGTTATACCATTATGGGACTGTTCGTCTGTATGTAAGGATCAATATCTATACGGTATACTATGTTATCTGTGAGTATAATTctcattaccacacacacacacacacacacacacactttggccATGTGCCCTTTAGAAATAATTTGTTTTTTGATATTTGGACCGTTCTCCATACTGAAGTCATCGGCTATCAGTTAAGTTCAACAAAAAACATACAGGGAATGTGACTGGCACACGGGGGGAATGTGACTGGCACACGGGGGGAATGTGACTGGCTTAGACAGGAGTGTGGAAGAGGACACACTTGTCTTTGGCACTCTACTCCTCAGATCATTGGTTATAAAGAAGTAATGGCAAAAGGACATGATGCATTCTCTCTGAGGAGGACTGAGGAAGACCACGATGGTGGTGGTGGCGAAGGAGGCCTCACTCGGACCAATCGTCATCGTCCAACTCTGAGGAGTCGTCTTCGCTGTCGCTGCATTCCACAGCAATACGGCGAGACAAGATGGCCGCTACGTCGTTGCCATAGTTATCCttcttctcctgctctttctGTTCCTCCACTTTACGAAGATTAAAACCTGcaagagagagcggggggggttttagggtgtgtttatgtgtactggtatctctatctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtcgtacctTGCCGGATAGCTGACAGCAAGTCATTGTGAGCGTCAGCGGGGGCTTCTGGCTGAACCTGGGTGGGTTTGAGAGGAGGGGGAGCCCcaatggagaaggagggaggggggaggccagaagaggggggaggagggcctgggggaggtgggggaggaggaggaggaggggcgccACCaccctgggggagagaggggggaggaggtggagagatggtggtctgggagagaggagaaggtggggCAGGGGGGGAGGGAtaggcagaggagaagagaggagggggagcaggaggGGAGGAGTCAAATccagagggggggagggggagggatccCCAagccagaggggggagggggaggtggggcagggggaggggccaGGTTGGGCCGGGAGCCACTGGAAGCAGAAGAGGTCATGGGAGGGGCTGGAGGAGGGTGTGTGGGGCTCAGAACGCTGGTGCGCTTCTGGGATGGTCCTCCGTACTGTCC

Function

NR:

description
PREDICTED: wiskott-Aldrich syndrome protein family member 2-like

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU2624569 False 1422 lncRNA 0.53 2 9628203 9630099
TU2624570 True 1379 lncRNA 0.53 2 9628203 9630099

Neighbor

gene id symbol gene type direction distance location
LOC110487884 LOC106570642 coding upstream 3508 9622027 ~ 9624695 (+)
cck-t cck-t coding upstream 54423 9568052 ~ 9573780 (+)
LOC110489367 LOC106570646 coding upstream 95541 9489794 ~ 9532662 (+)
LOC110487883 LOC106570652 coding upstream 198515 9410313 ~ 9429688 (+)
LOC110487882 LOC106570647 coding upstream 241859 9382727 ~ 9386344 (+)
LOC110487893 LOC106570636 coding downstream 419097 10049196 ~ 10064026 (+)
LOC118946535 NA coding downstream 461204 10091303 ~ 10092528 (+)
LOC118946540 NA coding downstream 691934 10318805 ~ 10323588 (+)
LOC110513484 LOC106570612 coding downstream 774273 10404372 ~ 10427604 (+)
si:ch211-199g17.9 syce1 coding downstream 807578 10437677 ~ 10441669 (+)
G2294664 NA non-coding upstream 2719 9625269 ~ 9625484 (+)
G2294661 NA non-coding upstream 9977 9618011 ~ 9618226 (+)
G2294649 NA non-coding upstream 43017 9584300 ~ 9585186 (+)
G2294636 NA non-coding upstream 73062 9549365 ~ 9555141 (+)
G2294632 NA non-coding upstream 87609 9539626 ~ 9540594 (+)
G2294605 NA non-coding downstream 118 9630217 ~ 9633050 (+)
G2294665 NA non-coding downstream 5044 9635143 ~ 9635531 (+)
G2294690 NA non-coding downstream 80898 9710997 ~ 9711541 (+)
G2294691 NA non-coding downstream 91169 9721268 ~ 9723084 (+)
G2294692 LOC106594721 non-coding downstream 99477 9729576 ~ 9774800 (+)
G2294452 LOC106570648 other upstream 290448 9335335 ~ 9337755 (+)
G2294081 NA other upstream 525017 9094792 ~ 9103186 (+)
G2293943 LOC106570655 other upstream 780951 8844013 ~ 8847252 (+)
G2293942 NA other upstream 832701 8791101 ~ 8876464 (+)
G2293829 NA other upstream 1116462 8510872 ~ 8511770 (+)
G2294925 NA other downstream 500017 10130116 ~ 10131651 (+)
LOC110487904 snrpd1 other downstream 884855 10509464 ~ 10521398 (+)
G2296150 LOC106570575 other downstream 1655394 11285493 ~ 11290303 (+)
G2296278 NA other downstream 1933448 11563547 ~ 11564590 (+)

Expression


Co-expression Network